| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpAngola_A1344 |
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| Symbol | phnD |
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| ID | 5799810 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pestis Angola |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010159 |
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| Strand | - |
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| Start bp | 1407184 |
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| End bp | 1408113 |
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| Gene Length | 930 bp |
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| Protein Length | 309 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 641339305 |
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| Product | phosphonate ABC transporter periplasmic phosphonate-binding protein |
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| Protein accession | YP_001605873 |
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| Protein GI | 162420158 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3221] ABC-type phosphate/phosphonate transport system, periplasmic component |
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| TIGRFAM ID | [TIGR01098] phosphate/phosphite/phosphonate ABC transporters, periplasmic binding protein
[TIGR03431] phosphonate ABC transporter, periplasmic phosphonate binding protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.0522706 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAGAAAA TATTATGCCT TACCTCATTG TTGGCTGGAA TGATGATATT TAATGCCACG
GCAGAGGATG CGCCAAAAGA AATTAATCTG GGCATTCTTG GTGGGCAAAA CGCGACACAG
CAGATTGGCG ATAATATGTG TGTCAAAGAA TTTTTAGATA AAGAATTAAA TGTAAAAACT
AATTTACATA ATGCCTCTGA CTATTCTGGT GTTATTCAAG GTGTTTTGGG CGGGAAAATT
GACTTAGTAT TGAGTATGTC ACCTTCTTCT TTCGCATCAA TTTATATCAA AGATCCTAAC
GCTGTTGAAT TGGTCGGAAT TGCCATTGAT GATACGGATA AATCTAGGGG TTATCACTCC
GTTGTGGTAG TTAAAGCGGA CAGTCCTTAC CAAAAACTTG AAGATTTGAA AGGCAAAGCA
TTTGGTTTTG CTGATCCAGA TTCAACATCT GGCTTCTTGA TCCCTAACCA AAGTTTCAAA
CAGCAGTTTG GTGGATCAGT GGACAATAAA TACAATAACT TCTTCTCCAG CGTCACGTTC
TCTGGGGGCC ATGAACAGGA CATTTTAGGT GTTATTAATG GTCAGTTTGC TGGTGCGGTA
ACGTGGGCAT CAATGATCGG TGATTATGAT ACTGGGTATA CCAGCGGTGC ATTCACGCGC
ATGATCCGCA TGGGCCAACC GGACCTCATG AAGAAGATTC GAATTATCTG GCAATCTCCG
TTGATCCCCA ATGGCCCGAT TTTAGTCCGT AGTGCTTTAC CGCCAGAGTT TAAAGCGCAG
TTAGTGGCTG CGATTAAAAA GTTAGATAAA GAAGATCACG GCTGCTTCAT TAAAGCGATG
GGCGGTAAAC AGCATATTGG TGAGACGTCA CTTAGCGAGT ATCAAAATAT TATTGATATG
AAGCGTGAAT TAACCAAAGG CGACCGTTAA
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| Protein sequence | MKKILCLTSL LAGMMIFNAT AEDAPKEINL GILGGQNATQ QIGDNMCVKE FLDKELNVKT
NLHNASDYSG VIQGVLGGKI DLVLSMSPSS FASIYIKDPN AVELVGIAID DTDKSRGYHS
VVVVKADSPY QKLEDLKGKA FGFADPDSTS GFLIPNQSFK QQFGGSVDNK YNNFFSSVTF
SGGHEQDILG VINGQFAGAV TWASMIGDYD TGYTSGAFTR MIRMGQPDLM KKIRIIWQSP
LIPNGPILVR SALPPEFKAQ LVAAIKKLDK EDHGCFIKAM GGKQHIGETS LSEYQNIIDM
KRELTKGDR
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