| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_3685 |
|---|
| Symbol | |
|---|
| ID | 3566797 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dechloromonas aromatica RCB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007298 |
|---|
| Strand | + |
|---|
| Start bp | 3959287 |
|---|
| End bp | 3960144 |
|---|
| Gene Length | 858 bp |
|---|
| Protein Length | 285 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 637682158 |
|---|
| Product | periplasmic binding protein-related protein |
|---|
| Protein accession | YP_286884 |
|---|
| Protein GI | 71909297 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG3221] ABC-type phosphate/phosphonate transport system, periplasmic component |
|---|
| TIGRFAM ID | [TIGR01098] phosphate/phosphite/phosphonate ABC transporters, periplasmic binding protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 55 |
|---|
| Plasmid unclonability p-value | 0.758241 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTTTTCG CAATTCGACA AGCTTCCTTC TATTTTCTAA GTCTCTGGCT TGTCCTTTGC
TCGCCTTTGA TCCTGGCTGC ACCGCCGCAG GAGATCAGCG TCGGCATCGT GCCGCAACAG
GCAGCCACGG CGCTGGCCAA GGCATGGATT CCGTTGCTGG CCGAAATTTC GCAACGTAGC
GGGATTCGCC TGACTTTCAA GACGGCGCCT GACATTCCAG CATTTGAAGA GCGCATGAAA
CGGGGCGAAT ACGACCTCGC CTACATGAAC CCCTACCACT ACACGGTTTT CAGCAAGCAG
CCGGGCTACC GGGCCTTTGC CCGGGAAAAG AATCGCAAGC TGGTTGGTAT CATCGTCGTG
CGCAAGGATG ACCCGAGCAG CAGCCTCGAA GAACTGGCCG GCAAGACCGT TGCCTTCCCG
GCACCGGCGG CCTTTGCCGC CAGCATCCTT CCCCGGGCCG AATTCTCGCG GAAAAACATC
CCGATCAAGG CTCAATTCGT CAATTCCCAT GACTCGGTCT ATCGTGGCGT CGCCCAAGGG
AGTTTCGCGG CTGGCGCAGG CATCAAGCGC ACCCTTGAGG CCATCGAGCC AGCCATTTCC
AGACAGCTGC GCATCCTTGC CACAACGCCA AGCTATGTTC CGCATGCCTT TGCAGCCCAT
CCGCGCGTGG CGGCCAGAAC GCTGGACAAG GTCATGGCCG CCATGCTGAC ACTGGACCTC
GACGAAGCGG GTCGCACCGC CCTTGAACCG CTCAGTTTCA AGGGCATCGA GGGTGGTGCG
GACAAGGATT GGGATGAAAT TCGCAAGCTG CGTATTGATC TTCAGGTTGG CCAACCCGGG
AAGTCGCCCC TGCCGTGA
|
|---|
| Protein sequence | MFFAIRQASF YFLSLWLVLC SPLILAAPPQ EISVGIVPQQ AATALAKAWI PLLAEISQRS
GIRLTFKTAP DIPAFEERMK RGEYDLAYMN PYHYTVFSKQ PGYRAFAREK NRKLVGIIVV
RKDDPSSSLE ELAGKTVAFP APAAFAASIL PRAEFSRKNI PIKAQFVNSH DSVYRGVAQG
SFAAGAGIKR TLEAIEPAIS RQLRILATTP SYVPHAFAAH PRVAARTLDK VMAAMLTLDL
DEAGRTALEP LSFKGIEGGA DKDWDEIRKL RIDLQVGQPG KSPLP
|
|---|
| |