| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_4085 |
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| Symbol | |
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| ID | 3911892 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | + |
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| Start bp | 4656508 |
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| End bp | 4657416 |
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| Gene Length | 909 bp |
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| Protein Length | 302 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637885989 |
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| Product | phosphonate-binding periplasmic protein |
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| Protein accession | YP_487689 |
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| Protein GI | 86751193 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3221] ABC-type phosphate/phosphonate transport system, periplasmic component |
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| TIGRFAM ID | [TIGR01098] phosphate/phosphite/phosphonate ABC transporters, periplasmic binding protein
[TIGR03431] phosphonate ABC transporter, periplasmic phosphonate binding protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.186944 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0769936 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCAAGT TCAGCACCGT TCTCGCAGGC GCCCTCGCGC TGGCGTTGAC CGCCTCGGCC
GCTCCGGCCC AGGATTGGAA GTCGAAATAT CCGGAACTGG TGTTCGGCAA GGTGCCGGAC
GAGAACGCCT CTGGCACCAC CACCCGCTGG ACGCCGCTGA CGGAGTATCT GTCGAAGAAG
CTCGGCACCA AGGTGACGCT GCGGATCGCC AACGACTATG CCGCCGTGAT CGAAGGCCAG
CGCTCCGGGA ACATCCAGAT CGCGATGTAC GGTCCGGCAT CCTATGCCCG CGCCTATCTG
ATCGGCGCCA AGGTCGAACC TTTCGCCATC GAAGTGAACA ATGACGGCAG CAAAGGGTAC
TACTCGGTCC TCTACGTGAA GACGGAGTCG CCCTACAAGA ACATTCAGGA CCTGAAGGGC
AAGAACCTTT GCCTGGTCGA TCCGAATTCG ACCTCGGGCA ACAACGTCCC CCGCTTCGAG
ATGAACAAGC TGTCGATCGA TCCGGACAAG TTCTTCGGCA AAGTGATTTA CGCCGGCAGC
CACGAGAATG CCGTGATCGG CGTCGCGCAG GGCACCTGCG ACGCCGCATT CAACTGGTGG
AACACCGAAG CCGAATCCAA CCTGCTGCGG ATGGACCGCA AGGGCATGGC CAAGGCGGCC
GACTTCCGCA TCATCCTGAA GTCCGACCAG ATCGTGAATT CGCCGATGGC CTATCTCACC
GACCTGCCGG CGGACCTGAA GGCGGCGATC CGCAAGGCGG TTCTCGATCT GGCGACCGAC
GATCCGGAAA CCTTCAACAA GATCTACGAA GGCAAGGGCA AGCCTTATGA CGCGGTCGAT
CACAAGGCCT ATCAGCCGGT CATCGATCTG ACGAAATTCG TCGACACCCT GCGCAAGAGC
AAATCCTGA
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| Protein sequence | MIKFSTVLAG ALALALTASA APAQDWKSKY PELVFGKVPD ENASGTTTRW TPLTEYLSKK
LGTKVTLRIA NDYAAVIEGQ RSGNIQIAMY GPASYARAYL IGAKVEPFAI EVNNDGSKGY
YSVLYVKTES PYKNIQDLKG KNLCLVDPNS TSGNNVPRFE MNKLSIDPDK FFGKVIYAGS
HENAVIGVAQ GTCDAAFNWW NTEAESNLLR MDRKGMAKAA DFRIILKSDQ IVNSPMAYLT
DLPADLKAAI RKAVLDLATD DPETFNKIYE GKGKPYDAVD HKAYQPVIDL TKFVDTLRKS
KS
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