19 homologs were found in PanDaTox collection
for query gene Swol_1753 on replicon NC_008346
Organism: Syntrophomonas wolfei subsp. wolfei str. Goettingen



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_008346  Swol_1753  hypothetical protein  100 
 
 		 315 aa  649    Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  1  n/a   
 
 
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NC_002976  SERP2458  CRISPR-associated Csm4 family protein  29.3 
 
 		 304 aa  153  4e-36  Staphylococcus epidermidis RP62A  Bacteria  normal  0.044153  n/a   
 
 
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NC_009565  TBFG_12834  hypothetical protein  31.23 
 
 		 302 aa  140  3e-32  Mycobacterium tuberculosis F11  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008532  STER_0976  hypothetical protein  27.38 
 
 		 299 aa  111  1.0000000000000001e-23  Streptococcus thermophilus LMD-9  Bacteria  normal  0.0564527  n/a   
 
 
-
 
NC_013501  Rmar_1634  CRISPR-associated RAMP protein, Csm4 family  26.36 
 
 		 330 aa  79.3  0.00000000000007  Rhodothermus marinus DSM 4252  Bacteria  hitchhiker  0.0000314588  n/a   
 
 
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NC_008639  Cpha266_2047  CRISPR-associated RAMP Csm4 family protein  22.76 
 
 		 354 aa  74.3  0.000000000002  Chlorobium phaeobacteroides DSM 266  Bacteria  normal  1  n/a   
 
 
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NC_009616  Tmel_1673  CRISPR-associated RAMP Csm4 family protein  27.16 
 
 		 313 aa  73.6  0.000000000005  Thermosipho melanesiensis BI429  Bacteria  normal  0.527021  n/a   
 
 
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NC_012034  Athe_2701  CRISPR-associated RAMP protein, Csm4 family  23.91 
 
 		 334 aa  69.3  0.00000000007  Anaerocellum thermophilum DSM 6725  Bacteria  normal  1  n/a   
 
 
-
 
NC_011060  Ppha_2451  CRISPR-associated RAMP protein, Csm4 family  22.56 
 
 		 354 aa  65.9  0.0000000009  Pelodictyon phaeoclathratiforme BU-1  Bacteria  normal  1  n/a   
 
 
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NC_009972  Haur_2478  CRISPR-associated RAMP Csm4 family protein  25 
 
 		 341 aa  64.7  0.000000002  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  1  n/a   
 
 
-
 
NC_010483  TRQ2_1012  CRISPR-associated RAMP Csm4 family protein  22.7 
 
 		 285 aa  54.7  0.000002  Thermotoga sp. RQ2  Bacteria  normal  1  n/a   
 
 
-
 
NC_009486  Tpet_1094  CRISPR-associated RAMP Csm4 family protein  22.7 
 
 		 285 aa  54.7  0.000002  Thermotoga petrophila RKU-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_011831  Cagg_3446  CRISPR-associated RAMP protein, Csm4 family  27.88 
 
 		 363 aa  54.3  0.000003  Chloroflexus aggregans DSM 9485  Bacteria  normal  1  normal  0.180108 
 
 
-
 
NC_009718  Fnod_1391  CRISPR-associated RAMP Csm4 family protein  23.32 
 
 		 321 aa  53.9  0.000003  Fervidobacterium nodosum Rt17-B1  Bacteria  normal  1  n/a   
 
 
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NC_009767  Rcas_1980  CRISPR-associated RAMP Csm4 family protein  27.27 
 
 		 380 aa  51.2  0.00002  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.390104  normal  0.234519 
 
 
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NC_010831  Cphamn1_1255  CRISPR-associated RAMP protein, Csm4 family  24.13 
 
 		 338 aa  50.4  0.00004  Chlorobium phaeobacteroides BS1  Bacteria  normal  1  hitchhiker  0.00348405 
 
 
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NC_014212  Mesil_0702  CRISPR-associated RAMP protein, Csm4 family  26.59 
 
 		 295 aa  46.2  0.0007  Meiothermus silvanus DSM 9946  Bacteria  normal  0.464078  hitchhiker  0.00522087 
 
 
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NC_010525  Tneu_1150  hypothetical protein  28.29 
 
 		 275 aa  45.8  0.0009  Thermoproteus neutrophilus V24Sta  Archaea  normal  0.0807368  hitchhiker  0.0000206945 
 
 
-
 
NC_013946  Mrub_0218  Csm4 family CRISPR-associated RAMP protein  24.8 
 
 		 295 aa  43.5  0.004  Meiothermus ruber DSM 1279  Bacteria  normal  0.800628  normal  1 
 
 
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