| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphamn1_1255 |
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| Symbol | |
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| ID | 6374932 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium phaeobacteroides BS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010831 |
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| Strand | + |
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| Start bp | 1360507 |
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| End bp | 1361523 |
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| Gene Length | 1017 bp |
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| Protein Length | 338 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 642683753 |
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| Product | CRISPR-associated RAMP protein, Csm4 family |
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| Protein accession | YP_001959668 |
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| Protein GI | 189500198 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1567] Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily) |
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| TIGRFAM ID | [TIGR01903] CRISPR-associated RAMP protein, Csm4 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.00348405 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCAGGCAC TCTTGTTGAT TCCCGTTGGT GGAGGTCAGT TTCACTTCGG AGAAAACGGC
CTTGAAGACA GCAGCGATCT GTTGCATTCA GATACCTTGT TTTCGGCGTT AGCGAACATC
TATGAGTACG CATTGAGCGG AGCAGAAATC TTTATCGATC TGGTCGAATC AGGGAGGCTT
TCGTTTTCAT CCGGGATGTA CGCATTGTTG AAACAGGGAG AGATGTCGCT GTTGTTTGTG
CCAAAACCAG TCGTGACCTA CAGAAAGTCC GATGACCGGA AGCTTCACAA GAGCCTGAAG
TATTTTTCTC TCGGGGTGTT AGAGGAGTTC AGGAAGAGCT TCGAATCACA GAAGCATGAG
TCCGAACTTG ACCTGAGCGT TTATTCCTCA ATCGGCAATG AGTTTCTTTG TCTCGCTGAT
GAGCTTGGGG GTATGCCGGA CGAATTTAAG AATCGCTCTT TTCGCAGATT TACGACCAGT
CCGAAAGTCA AAGTGCATAC CACGTTTGAG GACAATGATC GCTTGTATCA CGAGACCACG
GTGCAGTTCC ATACGTTTTC CGCTGCCGGA GTGGAATACG GGGGAGCCTA TTGCGTTCTT
TTCAATGCCG ATGCATTGAC CTACGAAGAA CGGCAGGAAT TTCTTGCCGC ACTGCGAATC
ATGGCCGACG AGGGTGTCGG CGGCCAGCGT TCTTCCGGCA AGGGGCAGTT CAGGGAAGTT
CGTGAAGTGA CTATCGATAT TCCTGATGAA GAGTCTGCAT CAGCATATCT GGGGTTATCG
ATTGTTTCCC CGGCCGATGA CAGTGAGTTC AATGCGCTGG AACGGTATGA GCTGTTCGTT
CGCGGAGGCG GTTCGCTGGG ATGGAGAGGG GATTCGGAAA GGCACCGCAA GCAGGCGCGG
TTCGTTAAAG AAGGGGCCCT GTTCACAAAG AACATTGCAG GTGCGCTCGT TGATGTGTCA
CCAGAAGGAG ATAAAACAAT CCTGCGTAAC GGGATGAATT TTTCCATTCC AATCTGA
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| Protein sequence | MQALLLIPVG GGQFHFGENG LEDSSDLLHS DTLFSALANI YEYALSGAEI FIDLVESGRL
SFSSGMYALL KQGEMSLLFV PKPVVTYRKS DDRKLHKSLK YFSLGVLEEF RKSFESQKHE
SELDLSVYSS IGNEFLCLAD ELGGMPDEFK NRSFRRFTTS PKVKVHTTFE DNDRLYHETT
VQFHTFSAAG VEYGGAYCVL FNADALTYEE RQEFLAALRI MADEGVGGQR SSGKGQFREV
REVTIDIPDE ESASAYLGLS IVSPADDSEF NALERYELFV RGGGSLGWRG DSERHRKQAR
FVKEGALFTK NIAGALVDVS PEGDKTILRN GMNFSIPI
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