17 homologs were found in PanDaTox collection
for query gene Haur_2478 on replicon NC_009972
Organism: Herpetosiphon aurantiacus ATCC 23779



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_009972  Haur_2478  CRISPR-associated RAMP Csm4 family protein  100 
 
 		 341 aa  703    Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  1  n/a   
 
 
-
 
NC_011831  Cagg_3446  CRISPR-associated RAMP protein, Csm4 family  36.41 
 
 		 363 aa  153  4e-36  Chloroflexus aggregans DSM 9485  Bacteria  normal  1  normal  0.180108 
 
 
-
 
NC_009767  Rcas_1980  CRISPR-associated RAMP Csm4 family protein  36.14 
 
 		 380 aa  152  5e-36  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.390104  normal  0.234519 
 
 
-
 
NC_012034  Athe_2701  CRISPR-associated RAMP protein, Csm4 family  25.51 
 
 		 334 aa  92.8  8e-18  Anaerocellum thermophilum DSM 6725  Bacteria  normal  1  n/a   
 
 
-
 
NC_013501  Rmar_1634  CRISPR-associated RAMP protein, Csm4 family  26.11 
 
 		 330 aa  85.9  9e-16  Rhodothermus marinus DSM 4252  Bacteria  hitchhiker  0.0000314588  n/a   
 
 
-
 
NC_008532  STER_0976  hypothetical protein  25.53 
 
 		 299 aa  77  0.0000000000004  Streptococcus thermophilus LMD-9  Bacteria  normal  0.0564527  n/a   
 
 
-
 
NC_009565  TBFG_12834  hypothetical protein  27.59 
 
 		 302 aa  74.7  0.000000000002  Mycobacterium tuberculosis F11  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008346  Swol_1753  hypothetical protein  25.42 
 
 		 315 aa  73.9  0.000000000003  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  1  n/a   
 
 
-
 
NC_009616  Tmel_1673  CRISPR-associated RAMP Csm4 family protein  24.26 
 
 		 313 aa  72.4  0.000000000009  Thermosipho melanesiensis BI429  Bacteria  normal  0.527021  n/a   
 
 
-
 
NC_009718  Fnod_1391  CRISPR-associated RAMP Csm4 family protein  23.03 
 
 		 321 aa  69.3  0.0000000001  Fervidobacterium nodosum Rt17-B1  Bacteria  normal  1  n/a   
 
 
-
 
NC_011060  Ppha_2451  CRISPR-associated RAMP protein, Csm4 family  25.6 
 
 		 354 aa  67.4  0.0000000003  Pelodictyon phaeoclathratiforme BU-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_002976  SERP2458  CRISPR-associated Csm4 family protein  24.05 
 
 		 304 aa  61.6  0.00000002  Staphylococcus epidermidis RP62A  Bacteria  normal  0.044153  n/a   
 
 
-
 
NC_008639  Cpha266_2047  CRISPR-associated RAMP Csm4 family protein  25.07 
 
 		 354 aa  60.8  0.00000003  Chlorobium phaeobacteroides DSM 266  Bacteria  normal  1  n/a   
 
 
-
 
NC_011661  Dtur_0609  CRISPR-associated RAMP protein, Csm4 family  23.24 
 
 		 338 aa  58.9  0.0000001  Dictyoglomus turgidum DSM 6724  Bacteria  normal  1  n/a   
 
 
-
 
NC_013946  Mrub_0218  Csm4 family CRISPR-associated RAMP protein  28.98 
 
 		 295 aa  49.7  0.00007  Meiothermus ruber DSM 1279  Bacteria  normal  0.800628  normal  1 
 
 
-
 
NC_014212  Mesil_0702  CRISPR-associated RAMP protein, Csm4 family  24.8 
 
 		 295 aa  47.8  0.0003  Meiothermus silvanus DSM 9946  Bacteria  normal  0.464078  hitchhiker  0.00522087 
 
 
-
 
NC_013502  Rmar_2823  CRISPR-associated RAMP protein, Csm4 family  22.07 
 
 		 339 aa  43.5  0.005  Rhodothermus marinus DSM 4252  Bacteria  normal  1  n/a   
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>