Gene Rmar_2823 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmar_2823 
Symbol 
ID8569494 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodothermus marinus DSM 4252 
KingdomBacteria 
Replicon accessionNC_013502 
Strand
Start bp26617 
End bp27636 
Gene Length1020 bp 
Protein Length339 aa 
Translation table11 
GC content64% 
IMG OID 
ProductCRISPR-associated RAMP protein, Csm4 family 
Protein accessionYP_003292078 
Protein GI268318360 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGTTTC AGGCTGTCTA TCTGTATCCC CGCGCTTCTT TTCGTACGCC CCTGCGGTCC 
GACACGCTCT GGGGACTGCT TGTGGTAGCG CTGCGCGTGG TGGCAGGCGA CCGGGAGGCC
GACGCCTTCA TCGAATCCTG TGAGCAAGGG CGGCCGCCGA TCCGTCTTTC CTCGGCCTTC
CCCTTCATGC AGGAGCAATC CGCGGATGGG CGGCCGGTTT TTCGCCACTT TTTCCCGAGG
CCGGTCCTCC CGCCGCCCCT GCTGGAGCCA TCGCAGGCCG ATGCGCAGGT CGTTTTTGAG
CAGATGAGGC AGGGGAAGAA AGTTCGCCGG ATACGCTGGC TTCCGCAGGA GCTCTTTGAA
CGCGTACTGC GGGGCGAGCT CGACGAGGCG GAGCTGCAGC AGGAGCTTCT GCAGCAGGAG
CAGTCCGGAG CGCGAAAACG CTGGCCCGTG CTTCTCACGC AGGACAACCT GCATACTTCG
ATCGACCGGC TTACCGGCAC CACGCGCCAG GAAAACGGGG CCGGCCAGCT CTTCTACAGC
CACGAATACT ACATGGAACG TGGTCAGGGT CTGTTCTTTC TGGTTGAGGG GGAGGTAGCA
CGCATTCTGC CGGCCCTGCG CTACCTGCAC CATGTGGGCT GGGGCGGCGA CAGTTCGGTG
GGCAAGGGGC ATTTCGACTG GGAATTGCGC GAGCTGGAGC TGAGGGTGCC TGAGAAGCCC
ACGCATCGGC TGCTCCTTTC GCTCTACAGT CCCACGCGTG CGGAGCTGGA CCATATCCGA
CAGCACCGGG ACCGCACGTT TTATCAGCTG GAGCGACGGC AGGGCTATGC CGGAGCTCAT
CGGCTGCCCG GAAGGGCTTA CCTGAAACGG CCGCTGTACA TGCTGTCGGA AGGGTCGCTC
GTTCCCGATC CCGGCCGTCC ACTGCTGGGC GCGGTGCATA CTGTGATGGA AGCGGCCGGG
GTTCAGGTGC GTCATAGCGG GCTGGCGCTC GACCTGCCCG CCAGGGTCGG TTTATCCTAA
 
Protein sequence
MTFQAVYLYP RASFRTPLRS DTLWGLLVVA LRVVAGDREA DAFIESCEQG RPPIRLSSAF 
PFMQEQSADG RPVFRHFFPR PVLPPPLLEP SQADAQVVFE QMRQGKKVRR IRWLPQELFE
RVLRGELDEA ELQQELLQQE QSGARKRWPV LLTQDNLHTS IDRLTGTTRQ ENGAGQLFYS
HEYYMERGQG LFFLVEGEVA RILPALRYLH HVGWGGDSSV GKGHFDWELR ELELRVPEKP
THRLLLSLYS PTRAELDHIR QHRDRTFYQL ERRQGYAGAH RLPGRAYLKR PLYMLSEGSL
VPDPGRPLLG AVHTVMEAAG VQVRHSGLAL DLPARVGLS