17 homologs were found in PanDaTox collection
for query gene Ppha_2451 on replicon NC_011060
Organism: Pelodictyon phaeoclathratiforme BU-1



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_011060  Ppha_2451  CRISPR-associated RAMP protein, Csm4 family  100 
 
 		 354 aa  732    Pelodictyon phaeoclathratiforme BU-1  Bacteria  normal  1  n/a   
 
 
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NC_008639  Cpha266_2047  CRISPR-associated RAMP Csm4 family protein  31.3 
 
 		 354 aa  135  9.999999999999999e-31  Chlorobium phaeobacteroides DSM 266  Bacteria  normal  1  n/a   
 
 
-
 
NC_012034  Athe_2701  CRISPR-associated RAMP protein, Csm4 family  27.4 
 
 		 334 aa  103  5e-21  Anaerocellum thermophilum DSM 6725  Bacteria  normal  1  n/a   
 
 
-
 
NC_013501  Rmar_1634  CRISPR-associated RAMP protein, Csm4 family  25.91 
 
 		 330 aa  93.6  4e-18  Rhodothermus marinus DSM 4252  Bacteria  hitchhiker  0.0000314588  n/a   
 
 
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NC_011831  Cagg_3446  CRISPR-associated RAMP protein, Csm4 family  25.61 
 
 		 363 aa  80.5  0.00000000000004  Chloroflexus aggregans DSM 9485  Bacteria  normal  1  normal  0.180108 
 
 
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NC_009718  Fnod_1391  CRISPR-associated RAMP Csm4 family protein  25.83 
 
 		 321 aa  79.7  0.00000000000007  Fervidobacterium nodosum Rt17-B1  Bacteria  normal  1  n/a   
 
 
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NC_010831  Cphamn1_1255  CRISPR-associated RAMP protein, Csm4 family  25.68 
 
 		 338 aa  78.2  0.0000000000002  Chlorobium phaeobacteroides BS1  Bacteria  normal  1  hitchhiker  0.00348405 
 
 
-
 
NC_009972  Haur_2478  CRISPR-associated RAMP Csm4 family protein  25.07 
 
 		 341 aa  72.4  0.00000000001  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  1  n/a   
 
 
-
 
NC_008346  Swol_1753  hypothetical protein  22.76 
 
 		 315 aa  70.9  0.00000000003  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  1  n/a   
 
 
-
 
NC_002976  SERP2458  CRISPR-associated Csm4 family protein  24.72 
 
 		 304 aa  68.6  0.0000000002  Staphylococcus epidermidis RP62A  Bacteria  normal  0.044153  n/a   
 
 
-
 
NC_009616  Tmel_1673  CRISPR-associated RAMP Csm4 family protein  25.14 
 
 		 313 aa  66.2  0.0000000007  Thermosipho melanesiensis BI429  Bacteria  normal  0.527021  n/a   
 
 
-
 
NC_009767  Rcas_1980  CRISPR-associated RAMP Csm4 family protein  25.33 
 
 		 380 aa  64.3  0.000000003  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.390104  normal  0.234519 
 
 
-
 
NC_009635  Maeo_1080  CRISPR-associated RAMP Csm4 family protein  23.7 
 
 		 383 aa  58.9  0.0000001  Methanococcus aeolicus Nankai-3  Archaea  normal  0.212277  n/a   
 
 
-
 
NC_008532  STER_0976  hypothetical protein  20.74 
 
 		 299 aa  56.2  0.0000009  Streptococcus thermophilus LMD-9  Bacteria  normal  0.0564527  n/a   
 
 
-
 
NC_009565  TBFG_12834  hypothetical protein  22.84 
 
 		 302 aa  54.7  0.000002  Mycobacterium tuberculosis F11  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010483  TRQ2_1012  CRISPR-associated RAMP Csm4 family protein  22.11 
 
 		 285 aa  46.6  0.0006  Thermotoga sp. RQ2  Bacteria  normal  1  n/a   
 
 
-
 
NC_009486  Tpet_1094  CRISPR-associated RAMP Csm4 family protein  22.11 
 
 		 285 aa  46.6  0.0006  Thermotoga petrophila RKU-1  Bacteria  normal  1  n/a   
 
 
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