| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_1094 |
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| Symbol | |
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| ID | 5171282 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermotoga petrophila RKU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009486 |
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| Strand | - |
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| Start bp | 1122574 |
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| End bp | 1123431 |
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| Gene Length | 858 bp |
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| Protein Length | 285 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640563611 |
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| Product | CRISPR-associated RAMP Csm4 family protein |
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| Protein accession | YP_001244684 |
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| Protein GI | 148270224 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1567] Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily) |
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| TIGRFAM ID | [TIGR01903] CRISPR-associated RAMP protein, Csm4 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 41 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAAGATGA GTTTCAGAAG TGGTTTCAGG GTGGGTAGGG GGAACGAGAC CGATTCCACC
CTCCCCACCA TCCATTCCGA TACCATCTAC GGTGCTGTTG TGTACCACGC TTTCAAGTGG
TCTGAGAAAG CCGAGGACTT TGCGAGAAAG TTGAAGGTCT CTTCTCTTCT GTTCGTTCGC
GGTGATCGCC TTCTTGTTCC AAAACCTTTT CTTTACAACA CCTATTCGTT GGAAGAAGAT
GATGAGGAAA GTCCAAAGGA GCTGAAGAAA GCAAGTTACG TTTTCCTGGA CAAGCTTGCT
AATTATCAGT CGATAAAGAA AGCAAGCGGT GCTGTCTGCA AGGAAAATCC GGTGGAGATA
GTGAGGATTC CAAGAAATTC CCTCGACAGG ATAACGAGTT CCTCCAATCT CTACTTTGTG
GAAGTTGCTT TCGTAAAAGA GGGGTTCACC CCAGCATTTC TGGCAGAATT TCCCGATGAA
TACGAGGATC TTTTCAAAAC AGCTGTCAAG TCTCTTGGAG ATAGTGGAAT AGGCGCTGAC
TCAACTTACG GATACGGACT TTTCAATGCT GAGTTCGAAA ATGCTCCAGA TTTCCCGGAA
GAGGGTGAGT ACTATCTCAC CCTGTCGCTG TTTGTGCCTT CCACAGAAGA GAGAGCAAAG
ATAAACGAAG GATACTACAG GATAATAAAA AGACGTGGCG TGAAACACGA CGAAATGAAA
GTGAAGAAAG AGCTTTTCTA TGTTCAGGAA GGTTCTGTGT TTCCTTTCAA GCCAGAGGGC
CGTGGGGTGT TGAAGATAGA GGACTATTTT GTTCAGACGT CTCCACTCTG CGTGGCTTTC
GGTGGTGATA GGAAATGA
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| Protein sequence | MKMSFRSGFR VGRGNETDST LPTIHSDTIY GAVVYHAFKW SEKAEDFARK LKVSSLLFVR
GDRLLVPKPF LYNTYSLEED DEESPKELKK ASYVFLDKLA NYQSIKKASG AVCKENPVEI
VRIPRNSLDR ITSSSNLYFV EVAFVKEGFT PAFLAEFPDE YEDLFKTAVK SLGDSGIGAD
STYGYGLFNA EFENAPDFPE EGEYYLTLSL FVPSTEERAK INEGYYRIIK RRGVKHDEMK
VKKELFYVQE GSVFPFKPEG RGVLKIEDYF VQTSPLCVAF GGDRK
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