Gene Cpha266_2047 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpha266_2047 
Symbol 
ID4568731 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides DSM 266 
KingdomBacteria 
Replicon accessionNC_008639 
Strand- 
Start bp2369102 
End bp2370166 
Gene Length1065 bp 
Protein Length354 aa 
Translation table11 
GC content40% 
IMG OID639766628 
ProductCRISPR-associated RAMP Csm4 family protein 
Protein accessionYP_912483 
Protein GI119357839 
COG category[L] Replication, recombination and repair 
COG ID[COG1567] Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily) 
TIGRFAM ID[TIGR01903] CRISPR-associated RAMP protein, Csm4 family 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATACAT ATATCGTACA TCTCTACTTT AAAAATGCCT TGCATGTTGG TGCTGCAAAT 
TCCGGAATAG GTATTGAGGC AACTCAGGAT TTTATTCATT CAGATACGCT CTGGGCTGCC 
ATTGCCAATC ACTGGGCAAT TTTGGGAAAA GTAGGCGATA TTTCCTTTGA TGATTTTCTG 
AACGGCTTTC GCACGAAACA CGATGATGGA ATTCGCCACA AAGAGGAACC GTTGTTTCGA 
ATATCATCGG CTTTTCCACT AACAGATAAT GGGCGTATGT ATTGGCTACC AAAGCCATTA 
TCTGTACCCA TGGCATTTTC AAAACGCAAT ATAGAAGACC GAGAAAATCA ACGCAAAGAG 
TACGGAAAAA AAGTAAAGCA GGAAAAGTTT ATTCCACTGA AAGTGTTCAA AGAATGGATG 
AATTTTGAAA AAAATGCAAG TGATGTTGGA GGAGCAAAAA GAGAAGGAAT TTCCAGTGGT 
CAAATGCGCC CTCATGCTAC CATTGATAGA ATATCAATGC GAGCACAACT TTTCCATTCC 
GGGATAACCT ATTTCGACAA GTTTGCTGTG CGGGTTGGTC TTTATTTTCT TATTCAATGT 
GGTAAGACAA CCAAAACTGC CCTTGAGAAA GTTTTTGAAG TGATCTATGA AGCTGGAGCT 
ATTGGGGGAA ACCGGAACAT TGGTCTCGGC AGTCTTTTTG AAAAACCATC CTTAACAGAG 
GCGAGCGAAT TTGCAGACCT CTTTAATACA GAAAATACCA ATGCGTATTG TTTGCTTTCT 
CTATGCTACC TTTCCGATGG TGAAATACCA AATGCAGAAA CAGCAGTCGC ATACAATCAT 
CTATTACGTA AAGGTTGGAC GGGATCACTC TCAGTCAGCT TACAGCGCAA ACGTAAAACT 
GTTTATATGT TCGCCGAAGG AAGCGTTTTT CAAACAAAAT TAAATGGCTG TTTGGCGGAC 
ATTACTCCAG ACAAAATCAT AACTCCTGAA TGGTACGGGC ATCACGATGT TTATCGTTAC 
GGTTATGCTC TTAGTGTGCC GATAAAAATC GACTTAGATG ACTGA
 
Protein sequence
MNTYIVHLYF KNALHVGAAN SGIGIEATQD FIHSDTLWAA IANHWAILGK VGDISFDDFL 
NGFRTKHDDG IRHKEEPLFR ISSAFPLTDN GRMYWLPKPL SVPMAFSKRN IEDRENQRKE 
YGKKVKQEKF IPLKVFKEWM NFEKNASDVG GAKREGISSG QMRPHATIDR ISMRAQLFHS 
GITYFDKFAV RVGLYFLIQC GKTTKTALEK VFEVIYEAGA IGGNRNIGLG SLFEKPSLTE 
ASEFADLFNT ENTNAYCLLS LCYLSDGEIP NAETAVAYNH LLRKGWTGSL SVSLQRKRKT 
VYMFAEGSVF QTKLNGCLAD ITPDKIITPE WYGHHDVYRY GYALSVPIKI DLDD