15 homologs were found in PanDaTox collection
for query gene Smal_2121 on replicon NC_011071
Organism: Stenotrophomonas maltophilia R551-3



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_011071  Smal_2121  hypothetical protein  100 
 
 		 204 aa  408  1e-113  Stenotrophomonas maltophilia R551-3  Bacteria  normal  1  normal  1 
 
 
-
 
NC_002947  PP_2597  hypothetical protein  49.26 
 
 		 222 aa  187  1e-46  Pseudomonas putida KT2440  Bacteria  normal  0.323808  normal  0.0340242 
 
 
-
 
NC_011071  Smal_2128  putative transcriptional regulator, TetR family  46.32 
 
 		 204 aa  159  3e-38  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.222135  normal  1 
 
 
-
 
NC_009438  Sputcn32_3670  hypothetical protein  38.1 
 
 		 236 aa  49.3  0.00004  Shewanella putrefaciens CN-32  Bacteria  normal  1  n/a   
 
 
-
 
NC_009997  Sbal195_3471  hypothetical protein  38.1 
 
 		 236 aa  49.3  0.00004  Shewanella baltica OS195  Bacteria  normal  1  hitchhiker  0.00958807 
 
 
-
 
NC_013203  Apar_0215  transcriptional regulator, TetR family  27.34 
 
 		 246 aa  48.9  0.00006  Atopobium parvulum DSM 20469  Bacteria  normal  1  normal  0.674801 
 
 
-
 
NC_009665  Shew185_3344  hypothetical protein  37.14 
 
 		 236 aa  48.1  0.00009  Shewanella baltica OS185  Bacteria  normal  1  n/a   
 
 
-
 
NC_013131  Caci_7832  transcriptional regulator, TetR family  31.76 
 
 		 253 aa  46.6  0.0003  Catenulispora acidiphila DSM 44928  Bacteria  normal  1  normal  0.0353896 
 
 
-
 
NC_008697  Noca_4938  regulatory protein, TetR  30.72 
 
 		 222 aa  45.4  0.0005  Nocardioides sp. JS614  Bacteria  normal  1  normal  0.0214473 
 
 
-
 
NC_014165  Tbis_2797  TetR family transcriptional regulator  31.75 
 
 		 242 aa  44.7  0.001  Thermobispora bispora DSM 43833  Bacteria  normal  0.139894  normal  0.287212 
 
 
-
 
NC_012669  Bcav_2480  transcriptional regulator, TetR family  32.14 
 
 		 221 aa  43.5  0.002  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.0883171  normal  0.233137 
 
 
-
 
NC_013947  Snas_3927  transcriptional regulator, TetR family  27.92 
 
 		 218 aa  43.9  0.002  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.69466  normal  1 
 
 
-
 
NC_013159  Svir_21550  site-specific recombinase, DNA invertase Pin  44.68 
 
 		 218 aa  43.1  0.003  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.850113  normal  1 
 
 
-
 
NC_008686  Pden_1491  TetR family transcriptional regulator  42.19 
 
 		 232 aa  42.7  0.004  Paracoccus denitrificans PD1222  Bacteria  normal  0.784951  normal  1 
 
 
-
 
NC_013093  Amir_5814  transcriptional regulator, TetR family  50 
 
 		 195 aa  41.6  0.007  Actinosynnema mirum DSM 43827  Bacteria  normal  1  n/a   
 
 
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