Gene Bcav_2480 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_2480 
Symbol 
ID7862014 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp2773490 
End bp2774155 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content73% 
IMG OID643866576 
Producttranscriptional regulator, TetR family 
Protein accessionYP_002882492 
Protein GI229820966 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0883171 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.233137 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGCGGAG TCGGCCTCAG CCGGGAGCGG GTGCTCGCCG CCGCTCTGGC GATCGTCGAC 
GCCGAGGGCG TCGACGGCCT GACGATGCGC CGGCTCGGTC GCGAGTGCGG CGTCGAGGCG
ATGTCCCTGT ACCGGCACGT CGCGAACAAG GACGACGTGC TCGCCGGGCT TCGGGAGCAG
GTCTGGGAGG GCGTGCTGAG CCGCATGCGC CGGACGGGCG TCGCGGACCG GAGAGTCACG
CTGCGGACCT ATGCGGATGC GCTTCTCGAA CCCCTGCTCG TGCACCCGGG ACTGGCCCCC
GTTGTGCTCG CCACCGGGGC CGAGGAGAGC CAGGTGCGCG TGAACGAGGA GCTCGCCGGC
CGGTTGCGCG CCGCCGGCGC TCAGCCGCTC GCCGCCCTCG CGGTGATTCA GCTCATCACC
TCGTTCGTGC TGGGGACGGC CGCGCTCGCC GGCATCCCGG GCGGTCCGTG GGAGGAACCG
GAAGGAGCGA GTGTGATCCC GGACCTCCTG GCTGACGACT CCGCCTGGCC CGGTCTCGCG
TGGTTGCGGA CGGCGGAGGG CGGCGAAGGT GGGGTTCGGG AGACCCTCGG TAGGCTCTAC
GACGAGGGGC TGGAGATGAT CCTCGACGGC ATCGAGGCGC GAGACCAAGG CCCACGACCA
GCCTGA
 
Protein sequence
MRGVGLSRER VLAAALAIVD AEGVDGLTMR RLGRECGVEA MSLYRHVANK DDVLAGLREQ 
VWEGVLSRMR RTGVADRRVT LRTYADALLE PLLVHPGLAP VVLATGAEES QVRVNEELAG
RLRAAGAQPL AALAVIQLIT SFVLGTAALA GIPGGPWEEP EGASVIPDLL ADDSAWPGLA
WLRTAEGGEG GVRETLGRLY DEGLEMILDG IEARDQGPRP A