Gene Amir_5814 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_5814 
Symbol 
ID8330021 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand- 
Start bp6851015 
End bp6851602 
Gene Length588 bp 
Protein Length195 aa 
Translation table11 
GC content71% 
IMG OID644946249 
Producttranscriptional regulator, TetR family 
Protein accessionYP_003103472 
Protein GI256379812 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGCGGAAG GCGCGTTGAC CGCGGAGTTG ATCCTCGGCA CCACCGAGGA CGTGCTGCGG 
CGCTACGGTC CGGCCAAGGC GACCGTGGTG GACGTGGCCA GGGCGCTCGG CGTGAGCCAC 
GGCAGCGTGT ACCGCCACTT CCCGACCAAG GCCGCGCTGC GGGAGGCCGT GGCGCGGCGG 
TGGTTGGAGC GCTGGCACGA GGGGCTGGCC GACGTCGCCC ACACCGACGC GCCTGCCGAG 
CAGCGCCTTC GCGACTGGCT CTCGACGCTG TTCGAGATCA AGCGCCAGAA GGTCCGCGAG 
GACCCCGAGC TGTTCGACAC CTTCGCCACC CTCATGCGGG AGAACCTCGC GGTGGTCGAC 
GACCACGTGA CCGGGCTGGA GAACGACCTG GCGAAGATCA TCGCCGACGG CATCGAGTCC 
GGCGACTTCG CCCCGCGCGA CTCCAAGGTG GCGGCGCGGG CGGTCTTCGA CGCCACCAAC 
CGCTTCCACG ACCCGATCTA CGCCGCCGAC TGGAAGGCCC CGACCATCGA CGTCGCCTTC 
AGCGCGGTGG TGTCACTGGT CGTGTCGGGC CTGAGCGTCC CGGACTGA
 
Protein sequence
MAEGALTAEL ILGTTEDVLR RYGPAKATVV DVARALGVSH GSVYRHFPTK AALREAVARR 
WLERWHEGLA DVAHTDAPAE QRLRDWLSTL FEIKRQKVRE DPELFDTFAT LMRENLAVVD 
DHVTGLENDL AKIIADGIES GDFAPRDSKV AARAVFDATN RFHDPIYAAD WKAPTIDVAF 
SAVVSLVVSG LSVPD