14 homologs were found in PanDaTox collection
for query gene Smal_2128 on replicon NC_011071
Organism: Stenotrophomonas maltophilia R551-3



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_011071  Smal_2128  putative transcriptional regulator, TetR family  100 
 
 		 204 aa  413  9.999999999999999e-116  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.222135  normal  1 
 
 
-
 
NC_002947  PP_2597  hypothetical protein  51.98 
 
 		 222 aa  208  5e-53  Pseudomonas putida KT2440  Bacteria  normal  0.323808  normal  0.0340242 
 
 
-
 
NC_011071  Smal_2121  hypothetical protein  46.32 
 
 		 204 aa  159  3e-38  Stenotrophomonas maltophilia R551-3  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009511  Swit_3366  regulatory protein, TetR  38.53 
 
 		 221 aa  55.5  0.0000006  Sphingomonas wittichii RW1  Bacteria  normal  0.402677  normal  0.315376 
 
 
-
 
NC_013131  Caci_7832  transcriptional regulator, TetR family  29.27 
 
 		 253 aa  46.2  0.0003  Catenulispora acidiphila DSM 44928  Bacteria  normal  1  normal  0.0353896 
 
 
-
 
NC_013947  Snas_1965  transcriptional regulator, TetR family  35.24 
 
 		 234 aa  46.2  0.0003  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.66981  normal  1 
 
 
-
 
NC_009665  Shew185_3344  hypothetical protein  24.62 
 
 		 236 aa  45.4  0.0006  Shewanella baltica OS185  Bacteria  normal  1  n/a   
 
 
-
 
NC_009438  Sputcn32_3670  hypothetical protein  24.62 
 
 		 236 aa  44.7  0.0009  Shewanella putrefaciens CN-32  Bacteria  normal  1  n/a   
 
 
-
 
NC_009997  Sbal195_3471  hypothetical protein  23.85 
 
 		 236 aa  43.5  0.002  Shewanella baltica OS195  Bacteria  normal  1  hitchhiker  0.00958807 
 
 
-
 
NC_012669  Bcav_3884  transcriptional regulator, TetR family  30.23 
 
 		 304 aa  43.9  0.002  Beutenbergia cavernae DSM 12333  Bacteria  normal  1  normal  0.162563 
 
 
-
 
NC_008686  Pden_1491  TetR family transcriptional regulator  27.37 
 
 		 232 aa  41.6  0.008  Paracoccus denitrificans PD1222  Bacteria  normal  0.784951  normal  1 
 
 
-
 
NC_009953  Sare_4960  TetR family transcriptional regulator  26.27 
 
 		 230 aa  41.6  0.008  Salinispora arenicola CNS-205  Bacteria  normal  0.0493125  normal  0.261942 
 
 
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NC_013595  Sros_4066  putative transcriptional regulator, TetR family  30.91 
 
 		 253 aa  41.2  0.01  Streptosporangium roseum DSM 43021  Bacteria  normal  0.546263  normal  0.272387 
 
 
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NC_014165  Tbis_1254  TetR family transcriptional regulator  33.11 
 
 		 223 aa  41.2  0.01  Thermobispora bispora DSM 43833  Bacteria  normal  0.297921  normal  0.284076 
 
 
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