87 homologs were found in PanDaTox collection
for query gene Smal_1439 on replicon NC_011071
Organism: Stenotrophomonas maltophilia R551-3



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011071  Smal_1439  pyridoxamine 5'-phosphate oxidase-related FMN-binding  100 
 
 
165 aa  336  9e-92  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.123209  normal 
 
 
-
 
NC_010717  PXO_00185  general stress protein  73.91 
 
 
166 aa  248  3e-65  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.78634  n/a   
 
 
-
 
NC_008025  Dgeo_0891  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  50.36 
 
 
169 aa  144  7.0000000000000006e-34  Deinococcus geothermalis DSM 11300  Bacteria  normal  normal  0.457578 
 
 
-
 
NC_011894  Mnod_1723  pyridoxamine 5'-phosphate oxidase-related FMN-binding  46.94 
 
 
169 aa  140  9.999999999999999e-33  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.0380368  n/a   
 
 
-
 
NC_010511  M446_0415  pyridoxamine 5'-phosphate oxidase-related FMN-binding  45.89 
 
 
169 aa  139  9.999999999999999e-33  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.0380541 
 
 
-
 
NC_008541  Arth_0043  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  42.42 
 
 
160 aa  137  4.999999999999999e-32  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_010172  Mext_4563  pyridoxamine 5'-phosphate oxidase-related FMN-binding  42.47 
 
 
167 aa  136  1e-31  Methylobacterium extorquens PA1  Bacteria  normal  0.535991  normal  0.356279 
 
 
-
 
NC_011757  Mchl_5023  pyridoxamine 5'-phosphate oxidase-related FMN-binding  42.47 
 
 
167 aa  135  2e-31  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.140709  normal  0.115662 
 
 
-
 
NC_010725  Mpop_5080  pyridoxamine 5'-phosphate oxidase-related FMN-binding  42.47 
 
 
167 aa  134  4e-31  Methylobacterium populi BJ001  Bacteria  normal  normal  0.71556 
 
 
-
 
NC_014151  Cfla_2950  pyridoxamine 5'-phosphate oxidase-related FMN- binding protein  47.5 
 
 
171 aa  134  4e-31  Cellulomonas flavigena DSM 20109  Bacteria  normal  normal 
 
 
-
 
NC_010505  Mrad2831_2143  pyridoxamine 5'-phosphate oxidase-related FMN-binding  43.15 
 
 
167 aa  134  5e-31  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.429446  normal 
 
 
-
 
NC_009972  Haur_1688  pyridoxamine 5'-phosphate oxidase-related FMN-binding  40.37 
 
 
165 aa  133  9.999999999999999e-31  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.317072  n/a   
 
 
-
 
NC_011886  Achl_0041  pyridoxamine 5'-phosphate oxidase-related FMN-binding  40.99 
 
 
160 aa  130  6.999999999999999e-30  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_007614  Nmul_A2175  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  39.49 
 
 
169 aa  127  5.0000000000000004e-29  Nitrosospira multiformis ATCC 25196  Bacteria  normal  n/a   
 
 
-
 
NC_013757  Gobs_4934  pyridoxamine 5'-phosphate oxidase-related FMN- binding protein  40.25 
 
 
159 aa  124  5e-28  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_013730  Slin_0534  pyridoxamine 5'-phosphate oxidase-related FMN- binding protein  40.14 
 
 
170 aa  124  6e-28  Spirosoma linguale DSM 74  Bacteria  normal  normal  0.536525 
 
 
-
 
NC_014248  Aazo_1306  pyridoxamine 5'-phosphate oxidase-like FMN-binding protein  41.43 
 
 
153 aa  123  1e-27  'Nostoc azollae' 0708  Bacteria  normal  n/a   
 
 
-
 
NC_013235  Namu_3457  pyridoxamine 5'-phosphate oxidase-related FMN- binding  39.87 
 
 
166 aa  122  2e-27  Nakamurella multipartita DSM 44233  Bacteria  hitchhiker  0.00322283  hitchhiker  0.00394331 
 
 
-
 
NC_013730  Slin_0757  pyridoxamine 5'-phosphate oxidase-related FMN- binding protein  39.61 
 
 
167 aa  121  4e-27  Spirosoma linguale DSM 74  Bacteria  normal  normal 
 
 
-
 
NC_013521  Sked_36910  uncharacterized stress protein (general stress protein 26)  38.79 
 
 
161 aa  116  9.999999999999999e-26  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.408882 
 
 
-
 
NC_009524  PsycPRwf_0544  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  35.76 
 
 
164 aa  116  9.999999999999999e-26  Psychrobacter sp. PRwf-1  Bacteria  decreased coverage  0.000110488  unclonable  0.00000000107777 
 
 
-
 
NC_013132  Cpin_1506  pyridoxamine 5'-phosphate oxidase-related FMN- binding  33.75 
 
 
167 aa  113  1.0000000000000001e-24  Chitinophaga pinensis DSM 2588  Bacteria  hitchhiker  0.00738794  normal 
 
 
-
 
NC_008752  Aave_0014  putative general stress protein 26  36.77 
 
 
165 aa  113  1.0000000000000001e-24  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_007413  Ava_4901  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  35.42 
 
 
152 aa  112  2.0000000000000002e-24  Anabaena variabilis ATCC 29413  Bacteria  hitchhiker  0.00000931865  normal  0.0570738 
 
 
-
 
NC_008009  Acid345_3048  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  41.55 
 
 
159 aa  111  4.0000000000000004e-24  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal 
 
 
-
 
NC_013440  Hoch_6194  pyridoxamine 5'-phosphate oxidase-related FMN- binding protein  39.22 
 
 
167 aa  109  2.0000000000000002e-23  Haliangium ochraceum DSM 14365  Bacteria  decreased coverage  0.000117715  normal 
 
 
-
 
NC_008255  CHU_0468  general stress protein  33.94 
 
 
165 aa  104  6e-22  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  normal 
 
 
-
 
NC_013172  Bfae_04320  uncharacterized stress protein (general stress protein 26)  38.81 
 
 
162 aa  103  1e-21  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_007204  Psyc_0186  hypothetical protein  33.12 
 
 
164 aa  102  2e-21  Psychrobacter arcticus 273-4  Bacteria  hitchhiker  0.0000256938  normal  0.169414 
 
 
-
 
NC_007969  Pcryo_0207  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  34.23 
 
 
164 aa  102  3e-21  Psychrobacter cryohalolentis K5  Bacteria  hitchhiker  0.0000595835  normal 
 
 
-
 
NC_008782  Ajs_4161  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  35.44 
 
 
168 aa  99.4  2e-20  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_011992  Dtpsy_0017  pyridoxamine 5'-phosphate oxidase-related FMN-binding  35.44 
 
 
168 aa  99.4  2e-20  Acidovorax ebreus TPSY  Bacteria  normal  0.0687493  n/a   
 
 
-
 
NC_013037  Dfer_4832  pyridoxamine 5'-phosphate oxidase-related FMN- binding  30.52 
 
 
166 aa  98.6  3e-20  Dyadobacter fermentans DSM 18053  Bacteria  normal  normal 
 
 
-
 
NC_009441  Fjoh_3362  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  32.68 
 
 
166 aa  96.3  2e-19  Flavobacterium johnsoniae UW101  Bacteria  normal  n/a   
 
 
-
 
NC_011004  Rpal_0214  pyridoxamine 5'-phosphate oxidase-related FMN-binding  40 
 
 
162 aa  96.3  2e-19  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.384494  n/a   
 
 
-
 
NC_013061  Phep_2509  hypothetical protein  33.99 
 
 
178 aa  95.5  3e-19  Pedobacter heparinus DSM 2366  Bacteria  normal  normal 
 
 
-
 
NC_013132  Cpin_6715  pyridoxamine 5'-phosphate oxidase-related FMN- binding  34.44 
 
 
178 aa  94  8e-19  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal 
 
 
-
 
NC_012854  Rleg_6338  pyridoxamine 5'-phosphate oxidase-related FMN-binding  33.96 
 
 
159 aa  92.8  2e-18  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
NC_007958  RPD_0477  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  37.91 
 
 
162 aa  92  3e-18  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.130245  normal  0.542758 
 
 
-
 
NC_008254  Meso_3651  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  40 
 
 
159 aa  90.9  6e-18  Chelativorans sp. BNC1  Bacteria  normal  0.187958  n/a   
 
 
-
 
NC_009621  Smed_5578  pyridoxamine 5'-phosphate oxidase-related FMN-binding  35.07 
 
 
145 aa  90.9  8e-18  Sinorhizobium medicae WSM419  Bacteria  normal  0.374657  normal  0.0885216 
 
 
-
 
NC_007959  Nham_4106  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  31.41 
 
 
163 aa  90.5  9e-18  Nitrobacter hamburgensis X14  Bacteria  normal  0.318371  n/a   
 
 
-
 
NC_011368  Rleg2_4578  pyridoxamine 5'-phosphate oxidase-related FMN-binding  34.16 
 
 
159 aa  90.1  1e-17  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.208727  normal 
 
 
-
 
NC_007778  RPB_0323  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  38.78 
 
 
162 aa  89.4  2e-17  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.17098  normal 
 
 
-
 
NC_012848  Rleg_5131  pyridoxamine 5'-phosphate oxidase-related FMN-binding  34.35 
 
 
149 aa  86.3  2e-16  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.286688  normal  0.0978012 
 
 
-
 
NC_008825  Mpe_A2178  uncharacterized stress protein  33.33 
 
 
194 aa  85.5  3e-16  Methylibium petroleiphilum PM1  Bacteria  normal  0.747799  normal  0.211573 
 
 
-
 
NC_007925  RPC_0067  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  35.77 
 
 
163 aa  85.1  4e-16  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.663335  normal  0.459209 
 
 
-
 
NC_008255  CHU_2296  general stress protein  32.26 
 
 
186 aa  84  8e-16  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  normal  0.0248237 
 
 
-
 
NC_011368  Rleg2_5427  pyridoxamine 5'-phosphate oxidase-related FMN-binding  33.59 
 
 
149 aa  84  8e-16  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  decreased coverage  0.0071751  hitchhiker  0.00705549 
 
 
-
 
NC_012803  Mlut_21290  uncharacterized stress protein (general stress protein 26)  36.92 
 
 
160 aa  83.6  0.000000000000001  Micrococcus luteus NCTC 2665  Bacteria  normal  0.967363  n/a   
 
 
-
 
NC_009485  BBta_0235  hypothetical protein  36.22 
 
 
161 aa  83.2  0.000000000000001  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.0424787  normal  0.647212 
 
 
-
 
NC_007406  Nwi_2671  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  28.93 
 
 
180 aa  82  0.000000000000003  Nitrobacter winogradskyi Nb-255  Bacteria  normal  0.455745  normal 
 
 
-
 
NC_013169  Ksed_03010  uncharacterized stress protein (general stress protein 26)  33.11 
 
 
146 aa  80.5  0.00000000000001  Kytococcus sedentarius DSM 20547  Bacteria  normal  normal 
 
 
-
 
NC_011891  A2cp1_3547  pyridoxamine 5'-phosphate oxidase-related FMN-binding  33.06 
 
 
153 aa  79.7  0.00000000000002  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_011145  AnaeK_3483  pyridoxamine 5'-phosphate oxidase-related FMN-binding  33.06 
 
 
153 aa  79.7  0.00000000000002  Anaeromyxobacter sp. K  Bacteria  normal  n/a   
 
 
-
 
NC_007760  Adeh_3400  FMN-binding pyridoxamine 5'-phosphate oxidase-related protein  32.23 
 
 
151 aa  76.3  0.0000000000002  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_009675  Anae109_3465  pyridoxamine 5'-phosphate oxidase-related FMN-binding  32.79 
 
 
148 aa  72.8  0.000000000002  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal  0.0524675 
 
 
-
 
NC_010717  PXO_00366  general stress protein  34.13 
 
 
162 aa  70.1  0.00000000001  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.222659  n/a   
 
 
-
 
NC_014230  CA2559_13353  possible general stress protein 26  29.84 
 
 
154 aa  67.4  0.00000000007  Croceibacter atlanticus HTCC2559  Bacteria  normal  n/a   
 
 
-
 
NC_011369  Rleg2_3213  hypothetical protein  28.26 
 
 
167 aa  67  0.0000000001  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_012850  Rleg_3508  hypothetical protein  30.08 
 
 
167 aa  66.6  0.0000000002  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.398913 
 
 
-
 
NC_006694  CNI01580  conserved hypothetical protein  25.93 
 
 
198 aa  65.1  0.0000000004  Cryptococcus neoformans var. neoformans JEC21  Eukaryota  normal  n/a   
 
 
-
 
NC_009428  Rsph17025_1889  hypothetical protein  26.28 
 
 
165 aa  59.3  0.00000002  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.632194  normal  0.504186 
 
 
-
 
NC_011989  Avi_3632  hypothetical protein  26.81 
 
 
167 aa  58.5  0.00000004  Agrobacterium vitis S4  Bacteria  normal  0.963892  n/a   
 
 
-
 
NC_009483  Gura_1554  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  26.51 
 
 
157 aa  54.3  0.0000008  Geobacter uraniireducens Rf4  Bacteria  normal  0.70083  n/a   
 
 
-
 
NC_010338  Caul_3141  general stress protein  30.94 
 
 
161 aa  53.9  0.0000009  Caulobacter sp. K31  Bacteria  normal  normal  0.0462992 
 
 
-
 
NC_011138  MADE_02295  general stress protein  24 
 
 
146 aa  53.5  0.000001  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  0.944357  n/a   
 
 
-
 
NC_007493  RSP_2384  hypothetical protein  25.76 
 
 
186 aa  50.4  0.00001  Rhodobacter sphaeroides 2.4.1  Bacteria  decreased coverage  0.00852398  n/a   
 
 
-
 
NC_009049  Rsph17029_1047  hypothetical protein  25.76 
 
 
186 aa  50.4  0.00001  Rhodobacter sphaeroides ATCC 17029  Bacteria  hitchhiker  0.00624108  normal  0.760938 
 
 
-
 
NC_007794  Saro_2041  general stress protein  27.96 
 
 
163 aa  48.1  0.00005  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  n/a   
 
 
-
 
NC_011145  AnaeK_3874  pyridoxamine 5'-phosphate oxidase-related FMN-binding  26.85 
 
 
183 aa  47.8  0.00007  Anaeromyxobacter sp. K  Bacteria  normal  n/a   
 
 
-
 
NC_011891  A2cp1_3961  pyridoxamine 5'-phosphate oxidase-related FMN-binding  25.45 
 
 
183 aa  47.4  0.0001  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  0.59446  n/a   
 
 
-
 
NC_011773  BCAH820_0464  general stress protein 26  25.95 
 
 
138 aa  47  0.0001  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_011772  BCG9842_B4840  general stress protein 26  28.04 
 
 
138 aa  47  0.0001  Bacillus cereus G9842  Bacteria  normal  normal 
 
 
-
 
NC_011725  BCB4264_A0483  general stress protein 26  28.04 
 
 
138 aa  47  0.0001  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_007760  Adeh_3818  FMN-binding pyridoxamine 5'-phosphate oxidase-related protein  26.17 
 
 
152 aa  46.6  0.0001  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.139253  n/a   
 
 
-
 
NC_006274  BCZK0392  general stress protein 26  25.95 
 
 
138 aa  47  0.0001  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_008688  Pden_4608  putative general stress protein 26  24.24 
 
 
160 aa  47  0.0001  Paracoccus denitrificans PD1222  Bacteria  normal  normal 
 
 
-
 
NC_005957  BT9727_0396  general stress protein 26  25.95 
 
 
138 aa  47  0.0001  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_011658  BCAH187_A0534  general stress protein 26  28.04 
 
 
138 aa  46.6  0.0002  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_003909  BCE_0533  general stress protein 26  27.1 
 
 
138 aa  46.2  0.0002  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_008048  Sala_2167  general stress protein  26.77 
 
 
154 aa  44.7  0.0005  Sphingopyxis alaskensis RB2256  Bacteria  normal  0.115401  normal  0.509563 
 
 
-
 
NC_007530  GBAA_0418  general stress protein 26  28.7 
 
 
138 aa  43.9  0.001  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_005945  BAS0405  general stress protein 26  28.7 
 
 
138 aa  43.9  0.001  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_010001  Cphy_2560  pyridoxamine 5'-phosphate oxidase-related FMN-binding  20.47 
 
 
144 aa  42  0.003  Clostridium phytofermentans ISDg  Bacteria  normal  n/a   
 
 
-
 
NC_010644  Emin_1432  pyridoxamine 5'-phosphate oxidase-related FMN-binding  20.41 
 
 
151 aa  42  0.004  Elusimicrobium minutum Pei191  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_0323  hypothetical protein  27.21 
 
 
163 aa  41.6  0.005  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
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