Gene RPC_0067 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_0067 
Symbol 
ID3971400 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp76880 
End bp77371 
Gene Length492 bp 
Protein Length163 aa 
Translation table11 
GC content62% 
IMG OID637923183 
Productpyridoxamine 5'-phosphate oxidase-related, FMN-binding 
Protein accessionYP_529965 
Protein GI90421595 
COG category[R] General function prediction only 
COG ID[COG3871] Uncharacterized stress protein (general stress protein 26) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.663335 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.459209 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGGCGG CTGAGTCCAA TTCCGGTGAT GTCAACCACG CCTGGGAGCT GATGGAGAAG 
ATCACCTTTG CGATGCTGGC GACCAAGGAC GGCGACAAGA TTCGCTCGCG GCCGATGGGC
GCCTATGTCG AGCCGCAGAA CAATGCGGTC TATTTTCTCA CCGACGCACG GCGCCACAAG
GACGAGGAGA TCGACCGCGA TCGTCACGTC AATCTCGCAT TCGCCGATAC CGGTGGCCAA
AAGTATGTGT CGGTGTGCGG CACCGCCGTG GTGTCCAACG ATCGCGCCAA GATCCGCGAG
CTGTTCACCA CCGCCGCCAA GGTGTGGTGG GACAGCGCGG AAGATCCGAA TATTCGCGTG
CTGAAGGTAA CGCCGGAGGA GGCCGAGTAT TGGGATTCGC CGGGCACCAT CGTCAGCACC
GTGAAGATGG CGGTGGCGGC GGTCAGCGGT GGGCGACCCG ACCTCGGCGA ACATCGAAAG
GTTGCGATCT GA
 
Protein sequence
MMAAESNSGD VNHAWELMEK ITFAMLATKD GDKIRSRPMG AYVEPQNNAV YFLTDARRHK 
DEEIDRDRHV NLAFADTGGQ KYVSVCGTAV VSNDRAKIRE LFTTAAKVWW DSAEDPNIRV
LKVTPEEAEY WDSPGTIVST VKMAVAAVSG GRPDLGEHRK VAI