86 homologs were found in PanDaTox collection
for query gene Mchl_5023 on replicon NC_011757
Organism: Methylobacterium chloromethanicum CM4



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011757  Mchl_5023  pyridoxamine 5'-phosphate oxidase-related FMN-binding  100 
 
 
167 aa  348  2e-95  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.140709  normal  0.115662 
 
 
-
 
NC_010172  Mext_4563  pyridoxamine 5'-phosphate oxidase-related FMN-binding  99.4 
 
 
167 aa  347  3e-95  Methylobacterium extorquens PA1  Bacteria  normal  0.535991  normal  0.356279 
 
 
-
 
NC_010725  Mpop_5080  pyridoxamine 5'-phosphate oxidase-related FMN-binding  96.41 
 
 
167 aa  340  5e-93  Methylobacterium populi BJ001  Bacteria  normal  normal  0.71556 
 
 
-
 
NC_010505  Mrad2831_2143  pyridoxamine 5'-phosphate oxidase-related FMN-binding  82.63 
 
 
167 aa  309  9e-84  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.429446  normal 
 
 
-
 
NC_011894  Mnod_1723  pyridoxamine 5'-phosphate oxidase-related FMN-binding  70.66 
 
 
169 aa  273  8e-73  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.0380368  n/a   
 
 
-
 
NC_010511  M446_0415  pyridoxamine 5'-phosphate oxidase-related FMN-binding  69.46 
 
 
169 aa  265  2e-70  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.0380541 
 
 
-
 
NC_013730  Slin_0534  pyridoxamine 5'-phosphate oxidase-related FMN- binding protein  47.26 
 
 
170 aa  154  5.0000000000000005e-37  Spirosoma linguale DSM 74  Bacteria  normal  normal  0.536525 
 
 
-
 
NC_013730  Slin_0757  pyridoxamine 5'-phosphate oxidase-related FMN- binding protein  43.51 
 
 
167 aa  140  9.999999999999999e-33  Spirosoma linguale DSM 74  Bacteria  normal  normal 
 
 
-
 
NC_007614  Nmul_A2175  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  45.45 
 
 
169 aa  139  1.9999999999999998e-32  Nitrosospira multiformis ATCC 25196  Bacteria  normal  n/a   
 
 
-
 
NC_011071  Smal_1439  pyridoxamine 5'-phosphate oxidase-related FMN-binding  42.47 
 
 
165 aa  135  2e-31  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.123209  normal 
 
 
-
 
NC_010717  PXO_00185  general stress protein  39.35 
 
 
166 aa  134  6.0000000000000005e-31  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.78634  n/a   
 
 
-
 
NC_014248  Aazo_1306  pyridoxamine 5'-phosphate oxidase-like FMN-binding protein  43.17 
 
 
153 aa  132  1.9999999999999998e-30  'Nostoc azollae' 0708  Bacteria  normal  n/a   
 
 
-
 
NC_013037  Dfer_4832  pyridoxamine 5'-phosphate oxidase-related FMN- binding  37.25 
 
 
166 aa  129  2.0000000000000002e-29  Dyadobacter fermentans DSM 18053  Bacteria  normal  normal 
 
 
-
 
NC_007413  Ava_4901  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  40.15 
 
 
152 aa  124  5e-28  Anabaena variabilis ATCC 29413  Bacteria  hitchhiker  0.00000931865  normal  0.0570738 
 
 
-
 
NC_011886  Achl_0041  pyridoxamine 5'-phosphate oxidase-related FMN-binding  37.67 
 
 
160 aa  124  6e-28  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_009972  Haur_1688  pyridoxamine 5'-phosphate oxidase-related FMN-binding  38.99 
 
 
165 aa  122  2e-27  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.317072  n/a   
 
 
-
 
NC_014151  Cfla_2950  pyridoxamine 5'-phosphate oxidase-related FMN- binding protein  41.5 
 
 
171 aa  120  6e-27  Cellulomonas flavigena DSM 20109  Bacteria  normal  normal 
 
 
-
 
NC_013132  Cpin_1506  pyridoxamine 5'-phosphate oxidase-related FMN- binding  34.48 
 
 
167 aa  120  9e-27  Chitinophaga pinensis DSM 2588  Bacteria  hitchhiker  0.00738794  normal 
 
 
-
 
NC_013521  Sked_36910  uncharacterized stress protein (general stress protein 26)  35.48 
 
 
161 aa  114  3.9999999999999997e-25  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.408882 
 
 
-
 
NC_008255  CHU_0468  general stress protein  37.84 
 
 
165 aa  113  1.0000000000000001e-24  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  normal 
 
 
-
 
NC_008009  Acid345_3048  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  36.64 
 
 
159 aa  112  2.0000000000000002e-24  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal 
 
 
-
 
NC_007959  Nham_4106  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  36.36 
 
 
163 aa  112  3e-24  Nitrobacter hamburgensis X14  Bacteria  normal  0.318371  n/a   
 
 
-
 
NC_013757  Gobs_4934  pyridoxamine 5'-phosphate oxidase-related FMN- binding protein  36.08 
 
 
159 aa  110  6e-24  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_008541  Arth_0043  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  33.56 
 
 
160 aa  110  9e-24  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_013235  Namu_3457  pyridoxamine 5'-phosphate oxidase-related FMN- binding  36.11 
 
 
166 aa  109  2.0000000000000002e-23  Nakamurella multipartita DSM 44233  Bacteria  hitchhiker  0.00322283  hitchhiker  0.00394331 
 
 
-
 
NC_008782  Ajs_4161  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  37.67 
 
 
168 aa  108  4.0000000000000004e-23  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_011992  Dtpsy_0017  pyridoxamine 5'-phosphate oxidase-related FMN-binding  37.67 
 
 
168 aa  108  4.0000000000000004e-23  Acidovorax ebreus TPSY  Bacteria  normal  0.0687493  n/a   
 
 
-
 
NC_008025  Dgeo_0891  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  33.33 
 
 
169 aa  106  1e-22  Deinococcus geothermalis DSM 11300  Bacteria  normal  normal  0.457578 
 
 
-
 
NC_008752  Aave_0014  putative general stress protein 26  34.48 
 
 
165 aa  105  3e-22  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_007406  Nwi_2671  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  33.77 
 
 
180 aa  105  4e-22  Nitrobacter winogradskyi Nb-255  Bacteria  normal  0.455745  normal 
 
 
-
 
NC_013172  Bfae_04320  uncharacterized stress protein (general stress protein 26)  30.86 
 
 
162 aa  103  8e-22  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_013440  Hoch_6194  pyridoxamine 5'-phosphate oxidase-related FMN- binding protein  41.41 
 
 
167 aa  102  2e-21  Haliangium ochraceum DSM 14365  Bacteria  decreased coverage  0.000117715  normal 
 
 
-
 
NC_008825  Mpe_A2178  uncharacterized stress protein  36.84 
 
 
194 aa  102  3e-21  Methylibium petroleiphilum PM1  Bacteria  normal  0.747799  normal  0.211573 
 
 
-
 
NC_009621  Smed_5578  pyridoxamine 5'-phosphate oxidase-related FMN-binding  36.23 
 
 
145 aa  99  3e-20  Sinorhizobium medicae WSM419  Bacteria  normal  0.374657  normal  0.0885216 
 
 
-
 
NC_013132  Cpin_6715  pyridoxamine 5'-phosphate oxidase-related FMN- binding  31.13 
 
 
178 aa  96.7  1e-19  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal 
 
 
-
 
NC_008255  CHU_2296  general stress protein  31.61 
 
 
186 aa  97.1  1e-19  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  normal  0.0248237 
 
 
-
 
NC_009441  Fjoh_3362  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  31.85 
 
 
166 aa  94.7  5e-19  Flavobacterium johnsoniae UW101  Bacteria  normal  n/a   
 
 
-
 
NC_007958  RPD_0477  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  34.62 
 
 
162 aa  94.4  6e-19  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.130245  normal  0.542758 
 
 
-
 
NC_009485  BBta_0235  hypothetical protein  34.13 
 
 
161 aa  93.2  1e-18  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.0424787  normal  0.647212 
 
 
-
 
NC_011004  Rpal_0214  pyridoxamine 5'-phosphate oxidase-related FMN-binding  33.76 
 
 
162 aa  92  3e-18  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.384494  n/a   
 
 
-
 
NC_011368  Rleg2_4578  pyridoxamine 5'-phosphate oxidase-related FMN-binding  34.67 
 
 
159 aa  92  3e-18  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.208727  normal 
 
 
-
 
NC_007925  RPC_0067  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  35.53 
 
 
163 aa  91.7  4e-18  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.663335  normal  0.459209 
 
 
-
 
NC_007778  RPB_0323  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  34.25 
 
 
162 aa  91.7  5e-18  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.17098  normal 
 
 
-
 
NC_008254  Meso_3651  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  31.17 
 
 
159 aa  90.1  1e-17  Chelativorans sp. BNC1  Bacteria  normal  0.187958  n/a   
 
 
-
 
NC_007204  Psyc_0186  hypothetical protein  33.57 
 
 
164 aa  89.7  2e-17  Psychrobacter arcticus 273-4  Bacteria  hitchhiker  0.0000256938  normal  0.169414 
 
 
-
 
NC_014230  CA2559_13353  possible general stress protein 26  29.49 
 
 
154 aa  87.4  8e-17  Croceibacter atlanticus HTCC2559  Bacteria  normal  n/a   
 
 
-
 
NC_011891  A2cp1_3547  pyridoxamine 5'-phosphate oxidase-related FMN-binding  34.38 
 
 
153 aa  87.4  8e-17  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_011145  AnaeK_3483  pyridoxamine 5'-phosphate oxidase-related FMN-binding  34.38 
 
 
153 aa  87.4  8e-17  Anaeromyxobacter sp. K  Bacteria  normal  n/a   
 
 
-
 
NC_012854  Rleg_6338  pyridoxamine 5'-phosphate oxidase-related FMN-binding  32.88 
 
 
159 aa  84.7  5e-16  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
NC_007969  Pcryo_0207  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  30.82 
 
 
164 aa  84.7  5e-16  Psychrobacter cryohalolentis K5  Bacteria  hitchhiker  0.0000595835  normal 
 
 
-
 
NC_007760  Adeh_3400  FMN-binding pyridoxamine 5'-phosphate oxidase-related protein  33.59 
 
 
151 aa  84  8e-16  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_012848  Rleg_5131  pyridoxamine 5'-phosphate oxidase-related FMN-binding  32.84 
 
 
149 aa  83.6  0.000000000000001  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.286688  normal  0.0978012 
 
 
-
 
NC_009524  PsycPRwf_0544  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  34.92 
 
 
164 aa  82.8  0.000000000000002  Psychrobacter sp. PRwf-1  Bacteria  decreased coverage  0.000110488  unclonable  0.00000000107777 
 
 
-
 
NC_011368  Rleg2_5427  pyridoxamine 5'-phosphate oxidase-related FMN-binding  32.09 
 
 
149 aa  82  0.000000000000003  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  decreased coverage  0.0071751  hitchhiker  0.00705549 
 
 
-
 
NC_013061  Phep_2509  hypothetical protein  31.34 
 
 
178 aa  82.4  0.000000000000003  Pedobacter heparinus DSM 2366  Bacteria  normal  normal 
 
 
-
 
NC_012803  Mlut_21290  uncharacterized stress protein (general stress protein 26)  31.47 
 
 
160 aa  81.6  0.000000000000004  Micrococcus luteus NCTC 2665  Bacteria  normal  0.967363  n/a   
 
 
-
 
NC_009675  Anae109_3465  pyridoxamine 5'-phosphate oxidase-related FMN-binding  33.33 
 
 
148 aa  81.3  0.000000000000006  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal  0.0524675 
 
 
-
 
NC_013169  Ksed_03010  uncharacterized stress protein (general stress protein 26)  31.47 
 
 
146 aa  78.2  0.00000000000005  Kytococcus sedentarius DSM 20547  Bacteria  normal  normal 
 
 
-
 
NC_009483  Gura_1554  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  25 
 
 
157 aa  68.2  0.00000000005  Geobacter uraniireducens Rf4  Bacteria  normal  0.70083  n/a   
 
 
-
 
NC_011989  Avi_3632  hypothetical protein  26.03 
 
 
167 aa  66.6  0.0000000002  Agrobacterium vitis S4  Bacteria  normal  0.963892  n/a   
 
 
-
 
NC_010717  PXO_00366  general stress protein  26.62 
 
 
162 aa  63.2  0.000000002  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.222659  n/a   
 
 
-
 
NC_007802  Jann_0955  putative general stress protein 26  26.21 
 
 
159 aa  58.5  0.00000004  Jannaschia sp. CCS1  Bacteria  normal  normal 
 
 
-
 
NC_012850  Rleg_3508  hypothetical protein  24.11 
 
 
167 aa  58.2  0.00000006  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.398913 
 
 
-
 
NC_011369  Rleg2_3213  hypothetical protein  23.4 
 
 
167 aa  56.6  0.0000002  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_010338  Caul_3141  general stress protein  26 
 
 
161 aa  54.3  0.0000008  Caulobacter sp. K31  Bacteria  normal  normal  0.0462992 
 
 
-
 
NC_009487  SaurJH9_2406  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  32.14 
 
 
140 aa  53.5  0.000001  Staphylococcus aureus subsp. aureus JH9  Bacteria  normal  0.0218087  n/a   
 
 
-
 
NC_009632  SaurJH1_2453  pyridoxamine 5'-phosphate oxidase-related FMN-binding  32.14 
 
 
140 aa  53.5  0.000001  Staphylococcus aureus subsp. aureus JH1  Bacteria  normal  0.168439  n/a   
 
 
-
 
NC_009428  Rsph17025_1889  hypothetical protein  22.22 
 
 
165 aa  53.5  0.000001  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.632194  normal  0.504186 
 
 
-
 
NC_011138  MADE_02295  general stress protein  24.2 
 
 
146 aa  53.5  0.000001  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  0.944357  n/a   
 
 
-
 
NC_002976  SERP1973  general stress protein 26, putative  29.84 
 
 
140 aa  53.1  0.000002  Staphylococcus epidermidis RP62A  Bacteria  hitchhiker  0.0000492274  n/a   
 
 
-
 
NC_008228  Patl_2404  general stress protein  23.81 
 
 
154 aa  50.8  0.000008  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_006694  CNI01580  conserved hypothetical protein  25.17 
 
 
198 aa  50.8  0.000008  Cryptococcus neoformans var. neoformans JEC21  Eukaryota  normal  n/a   
 
 
-
 
NC_007760  Adeh_3818  FMN-binding pyridoxamine 5'-phosphate oxidase-related protein  23.68 
 
 
152 aa  50.8  0.000008  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.139253  n/a   
 
 
-
 
NC_013595  Sros_0323  hypothetical protein  28.57 
 
 
163 aa  50.1  0.00001  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_011891  A2cp1_3961  pyridoxamine 5'-phosphate oxidase-related FMN-binding  22.81 
 
 
183 aa  49.3  0.00002  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  0.59446  n/a   
 
 
-
 
NC_007493  RSP_2384  hypothetical protein  23.02 
 
 
186 aa  49.7  0.00002  Rhodobacter sphaeroides 2.4.1  Bacteria  decreased coverage  0.00852398  n/a   
 
 
-
 
NC_009049  Rsph17029_1047  hypothetical protein  23.02 
 
 
186 aa  49.7  0.00002  Rhodobacter sphaeroides ATCC 17029  Bacteria  hitchhiker  0.00624108  normal  0.760938 
 
 
-
 
NC_011145  AnaeK_3874  pyridoxamine 5'-phosphate oxidase-related FMN-binding  23.89 
 
 
183 aa  49.3  0.00003  Anaeromyxobacter sp. K  Bacteria  normal  n/a   
 
 
-
 
NC_008688  Pden_4608  putative general stress protein 26  23.23 
 
 
160 aa  48.5  0.00004  Paracoccus denitrificans PD1222  Bacteria  normal  normal 
 
 
-
 
NC_009972  Haur_1512  pyridoxamine 5'-phosphate oxidase-related FMN-binding  37.5 
 
 
209 aa  43.1  0.002  Herpetosiphon aurantiacus ATCC 23779  Bacteria  hitchhiker  0.000362889  n/a   
 
 
-
 
NC_013441  Gbro_3217  PPOX class putative F420-dependent enzyme  30.68 
 
 
166 aa  42.4  0.003  Gordonia bronchialis DSM 43247  Bacteria  normal  0.732162  n/a   
 
 
-
 
NC_010001  Cphy_2560  pyridoxamine 5'-phosphate oxidase-related FMN-binding  17.8 
 
 
144 aa  42.4  0.003  Clostridium phytofermentans ISDg  Bacteria  normal  n/a   
 
 
-
 
NC_010184  BcerKBAB4_0398  pyridoxamine 5'-phosphate oxidase-related FMN-binding  24.43 
 
 
138 aa  42.4  0.003  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_007777  Francci3_3915  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  29.7 
 
 
158 aa  42  0.004  Frankia sp. CcI3  Bacteria  normal  normal 
 
 
-
 
NC_010623  Bphy_4756  pyridoxamine 5'-phosphate oxidase-related FMN-binding  29.07 
 
 
210 aa  41.6  0.005  Burkholderia phymatum STM815  Bacteria  normal  0.184119  normal  0.709041 
 
 
-
 
NC_013204  Elen_0701  pyridoxamine 5'-phosphate oxidase-related FMN- binding  23.58 
 
 
142 aa  41.2  0.006  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
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