Gene RPB_0323 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_0323 
Symbol 
ID3908704 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp368140 
End bp368628 
Gene Length489 bp 
Protein Length162 aa 
Translation table11 
GC content62% 
IMG OID637882209 
Productpyridoxamine 5'-phosphate oxidase-related, FMN-binding 
Protein accessionYP_483945 
Protein GI86747449 
COG category[R] General function prediction only 
COG ID[COG3871] Uncharacterized stress protein (general stress protein 26) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.17098 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGGTGA ACACCAATCA GGGCGACGCG CAGCACGCCT GGGATCTGAT GAAGACAATC 
ACCTTCGCGA TGCTGGCGAC GCGCGACGGC GAGAAGATTC GCTCGCGGCC GATGGCGGCC
TATATCCGTC CCGACGAAGG CCTGATCTAT TTTCTCACCG ACGTGCGCCG CCACAAGGAC
GACGAGATCG CGCAGGATCA CCACGTCAAT CTCGGTTTCG CCGACGCAAG CGCGCAGAAA
TACGTCTCGG TGTCCGGCTA TGCGGCGATC TCGAATGATC GCGGCAAGAT CAAGGAGCTG
TTCGGCACCG CTGCGAAAGC GTGGTGGGAC AGTCCCGACG ATCCGAACAT CCGCATCCTC
AAGGTCACGC CGGAGGAAGC CGAGTACTGG GACTCGCCCG GTACCCTCGT CAGCTACGTC
AAGATGGCGG TGGCGGCTGC GACCGGCACA CGCCCCGACC TCGGTGACAA TCGCAAGGTG
GCGATTTGA
 
Protein sequence
MAVNTNQGDA QHAWDLMKTI TFAMLATRDG EKIRSRPMAA YIRPDEGLIY FLTDVRRHKD 
DEIAQDHHVN LGFADASAQK YVSVSGYAAI SNDRGKIKEL FGTAAKAWWD SPDDPNIRIL
KVTPEEAEYW DSPGTLVSYV KMAVAAATGT RPDLGDNRKV AI