Gene Cpin_1506 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_1506 
Symbol 
ID8357647 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp1851855 
End bp1852358 
Gene Length504 bp 
Protein Length167 aa 
Translation table11 
GC content45% 
IMG OID644963686 
Productpyridoxamine 5'-phosphate oxidase-related FMN- binding 
Protein accessionYP_003121204 
Protein GI256420551 
COG category[R] General function prediction only 
COG ID[COG3871] Uncharacterized stress protein (general stress protein 26) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00738794 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGCAA TCCTCAAAAG AGAAGAGGCG ATCAGAAAGG TCTCTGATCT GATTAACGAT 
GTGCGGGTAT GTATGTTTAC TACCGTTGAC GAGCACGGCC ACGTTATTTC AAGACCTATG
GCAACTGTAG ACGTTGACAA AGAAGGGAAT GTATGGTTCT TTTCCAATGA ATATGCAGGT
CAGGTGATGC AGATTTCAGA AAATAATGAG CTGAATCTGA TTTATTCCCA CCCGGGGCAC
AATACTTATT TAAACATCTT TGGTATCGGA TCGATCGTGC TGGACCGTGA AAAAATGAAA
CAGTTGTGGA CGCCGGCTGT TGAAGCGTGG TTCCCCGACG GTATTGACGA TCCCCGGCTT
TGTCTGTTGA AAGTAGATAC GAAACAGGCC TGGTTCTGGG ATAATTCTTC CAGCAAGATG
GTGATCTTCT TTAATATGCT GACCTCAATC ATCCGGGGAA GACGCTTTGA GGAAGGCGAG
AAAGGAGAAC TGGATATAGA ATAG
 
Protein sequence
MAAILKREEA IRKVSDLIND VRVCMFTTVD EHGHVISRPM ATVDVDKEGN VWFFSNEYAG 
QVMQISENNE LNLIYSHPGH NTYLNIFGIG SIVLDREKMK QLWTPAVEAW FPDGIDDPRL
CLLKVDTKQA WFWDNSSSKM VIFFNMLTSI IRGRRFEEGE KGELDIE