Gene Slin_0534 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_0534 
Symbol 
ID8724262 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp656295 
End bp656807 
Gene Length513 bp 
Protein Length170 aa 
Translation table11 
GC content51% 
IMG OID 
Productpyridoxamine 5'-phosphate oxidase-related FMN- binding protein 
Protein accessionYP_003385397 
Protein GI284035467 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.536525 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAGCTC AACGCACCCT GAATCCAATC GAACTGGATA AACTCAAAGA CAAAATCAAA 
GATATTCGCA TTGCCATGCT TACCACCCAG GAGTCGGACG GTGATTTCCA TACCCGCCCC
ATGGCGATGC ATGAGATGGA CCCCGACGGC ACGATGTGGT TTTTTACCTA CGAAAACTCG
AATAAGGTTA GCGAAATTCG CCAGAATGAG CGGGTTGCGC TGGGCTTTTC GGACCCCGAT
TCGGAGGTAT ACGTGTCGAC ATCCGGCTAT GCTGAAGTCG TGAAAGACAA AGCCAAGATC
GACCAGTTAT GGAGCGATTT CCTGAAAACA TGGTTCCCGA ATGGCAAAGA CGATCCGGAG
GTTACGCTGC TCAAAGTGAC AACCCATGCT GGTGAATACT GGGATCGGCC GGGGGGCAAA
ATGGTGAAGT TATTCGAAAT GGCGAAAGGT GCTATCACGG GCGATACGGA TAAAACGGGC
CGCAACGAGA AGTTCGGCGA TGAGCCCCAG TAA
 
Protein sequence
MQAQRTLNPI ELDKLKDKIK DIRIAMLTTQ ESDGDFHTRP MAMHEMDPDG TMWFFTYENS 
NKVSEIRQNE RVALGFSDPD SEVYVSTSGY AEVVKDKAKI DQLWSDFLKT WFPNGKDDPE
VTLLKVTTHA GEYWDRPGGK MVKLFEMAKG AITGDTDKTG RNEKFGDEPQ