64 homologs were found in PanDaTox collection
for query gene MADE_02295 on replicon NC_011138
Organism: Alteromonas macleodii 'Deep ecotype'



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011138  MADE_02295  general stress protein  100 
 
 
146 aa  301  2.0000000000000002e-81  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  0.944357  n/a   
 
 
-
 
NC_008228  Patl_2404  general stress protein  58.9 
 
 
154 aa  186  1e-46  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_008048  Sala_2167  general stress protein  53.42 
 
 
154 aa  156  1e-37  Sphingopyxis alaskensis RB2256  Bacteria  normal  0.115401  normal  0.509563 
 
 
-
 
NC_007794  Saro_2041  general stress protein  48.28 
 
 
163 aa  135  2e-31  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  n/a   
 
 
-
 
NC_010717  PXO_00366  general stress protein  40.74 
 
 
162 aa  112  2.0000000000000002e-24  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.222659  n/a   
 
 
-
 
NC_010338  Caul_3141  general stress protein  41.01 
 
 
161 aa  107  4.0000000000000004e-23  Caulobacter sp. K31  Bacteria  normal  normal  0.0462992 
 
 
-
 
NC_012850  Rleg_3508  hypothetical protein  35.29 
 
 
167 aa  85.1  3e-16  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.398913 
 
 
-
 
NC_011369  Rleg2_3213  hypothetical protein  35.29 
 
 
167 aa  84.7  4e-16  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_011989  Avi_3632  hypothetical protein  35.29 
 
 
167 aa  79  0.00000000000002  Agrobacterium vitis S4  Bacteria  normal  0.963892  n/a   
 
 
-
 
NC_008688  Pden_4608  putative general stress protein 26  32.43 
 
 
160 aa  75.1  0.0000000000003  Paracoccus denitrificans PD1222  Bacteria  normal  normal 
 
 
-
 
NC_007493  RSP_2384  hypothetical protein  33.06 
 
 
186 aa  71.2  0.000000000004  Rhodobacter sphaeroides 2.4.1  Bacteria  decreased coverage  0.00852398  n/a   
 
 
-
 
NC_009049  Rsph17029_1047  hypothetical protein  33.06 
 
 
186 aa  71.2  0.000000000004  Rhodobacter sphaeroides ATCC 17029  Bacteria  hitchhiker  0.00624108  normal  0.760938 
 
 
-
 
NC_009428  Rsph17025_1889  hypothetical protein  35.29 
 
 
165 aa  69.7  0.00000000001  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.632194  normal  0.504186 
 
 
-
 
NC_013521  Sked_36910  uncharacterized stress protein (general stress protein 26)  33.85 
 
 
161 aa  67.4  0.00000000007  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.408882 
 
 
-
 
NC_013730  Slin_0757  pyridoxamine 5'-phosphate oxidase-related FMN- binding protein  30.77 
 
 
167 aa  64.7  0.0000000004  Spirosoma linguale DSM 74  Bacteria  normal  normal 
 
 
-
 
NC_013440  Hoch_6194  pyridoxamine 5'-phosphate oxidase-related FMN- binding protein  32.12 
 
 
167 aa  64.7  0.0000000004  Haliangium ochraceum DSM 14365  Bacteria  decreased coverage  0.000117715  normal 
 
 
-
 
NC_007802  Jann_0955  putative general stress protein 26  29.41 
 
 
159 aa  63.5  0.0000000008  Jannaschia sp. CCS1  Bacteria  normal  normal 
 
 
-
 
NC_013037  Dfer_4832  pyridoxamine 5'-phosphate oxidase-related FMN- binding  28.68 
 
 
166 aa  62.8  0.000000001  Dyadobacter fermentans DSM 18053  Bacteria  normal  normal 
 
 
-
 
NC_008752  Aave_0014  putative general stress protein 26  30.82 
 
 
165 aa  63.2  0.000000001  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_011992  Dtpsy_0017  pyridoxamine 5'-phosphate oxidase-related FMN-binding  25.79 
 
 
168 aa  62.8  0.000000002  Acidovorax ebreus TPSY  Bacteria  normal  0.0687493  n/a   
 
 
-
 
NC_008782  Ajs_4161  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  25.79 
 
 
168 aa  62.8  0.000000002  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_007413  Ava_4901  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  27.87 
 
 
152 aa  62.4  0.000000002  Anabaena variabilis ATCC 29413  Bacteria  hitchhiker  0.00000931865  normal  0.0570738 
 
 
-
 
NC_010511  M446_0415  pyridoxamine 5'-phosphate oxidase-related FMN-binding  22.88 
 
 
169 aa  60.5  0.000000008  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.0380541 
 
 
-
 
NC_010505  Mrad2831_2143  pyridoxamine 5'-phosphate oxidase-related FMN-binding  26.75 
 
 
167 aa  60.5  0.000000008  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.429446  normal 
 
 
-
 
NC_011894  Mnod_1723  pyridoxamine 5'-phosphate oxidase-related FMN-binding  25.2 
 
 
169 aa  60.1  0.00000001  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.0380368  n/a   
 
 
-
 
NC_013132  Cpin_1506  pyridoxamine 5'-phosphate oxidase-related FMN- binding  28.57 
 
 
167 aa  59.7  0.00000001  Chitinophaga pinensis DSM 2588  Bacteria  hitchhiker  0.00738794  normal 
 
 
-
 
NC_010717  PXO_00185  general stress protein  28.1 
 
 
166 aa  57.4  0.00000007  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.78634  n/a   
 
 
-
 
NC_009972  Haur_1688  pyridoxamine 5'-phosphate oxidase-related FMN-binding  28.77 
 
 
165 aa  57  0.00000009  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.317072  n/a   
 
 
-
 
NC_009485  BBta_0235  hypothetical protein  24.11 
 
 
161 aa  56.6  0.0000001  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.0424787  normal  0.647212 
 
 
-
 
NC_014248  Aazo_1306  pyridoxamine 5'-phosphate oxidase-like FMN-binding protein  26.45 
 
 
153 aa  55.5  0.0000002  'Nostoc azollae' 0708  Bacteria  normal  n/a   
 
 
-
 
NC_008255  CHU_2296  general stress protein  25.36 
 
 
186 aa  56.2  0.0000002  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  normal  0.0248237 
 
 
-
 
NC_010172  Mext_4563  pyridoxamine 5'-phosphate oxidase-related FMN-binding  24.84 
 
 
167 aa  55.1  0.0000003  Methylobacterium extorquens PA1  Bacteria  normal  0.535991  normal  0.356279 
 
 
-
 
NC_013730  Slin_0534  pyridoxamine 5'-phosphate oxidase-related FMN- binding protein  28.79 
 
 
170 aa  55.1  0.0000003  Spirosoma linguale DSM 74  Bacteria  normal  normal  0.536525 
 
 
-
 
NC_010725  Mpop_5080  pyridoxamine 5'-phosphate oxidase-related FMN-binding  26.47 
 
 
167 aa  54.7  0.0000004  Methylobacterium populi BJ001  Bacteria  normal  normal  0.71556 
 
 
-
 
NC_012854  Rleg_6338  pyridoxamine 5'-phosphate oxidase-related FMN-binding  25.35 
 
 
159 aa  54.7  0.0000004  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
NC_011368  Rleg2_4578  pyridoxamine 5'-phosphate oxidase-related FMN-binding  24.11 
 
 
159 aa  54.3  0.0000006  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.208727  normal 
 
 
-
 
NC_011071  Smal_1439  pyridoxamine 5'-phosphate oxidase-related FMN-binding  24 
 
 
165 aa  53.5  0.0000008  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.123209  normal 
 
 
-
 
NC_011757  Mchl_5023  pyridoxamine 5'-phosphate oxidase-related FMN-binding  24.2 
 
 
167 aa  53.5  0.0000009  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.140709  normal  0.115662 
 
 
-
 
NC_007614  Nmul_A2175  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  29.93 
 
 
169 aa  52.8  0.000001  Nitrosospira multiformis ATCC 25196  Bacteria  normal  n/a   
 
 
-
 
NC_007958  RPD_0477  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  25.37 
 
 
162 aa  52  0.000003  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.130245  normal  0.542758 
 
 
-
 
NC_008254  Meso_3651  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  25.19 
 
 
159 aa  51.6  0.000003  Chelativorans sp. BNC1  Bacteria  normal  0.187958  n/a   
 
 
-
 
NC_007969  Pcryo_0207  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  27.74 
 
 
164 aa  51.6  0.000003  Psychrobacter cryohalolentis K5  Bacteria  hitchhiker  0.0000595835  normal 
 
 
-
 
NC_008025  Dgeo_0891  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  23.29 
 
 
169 aa  52  0.000003  Deinococcus geothermalis DSM 11300  Bacteria  normal  normal  0.457578 
 
 
-
 
NC_008825  Mpe_A2178  uncharacterized stress protein  26.8 
 
 
194 aa  50.1  0.000009  Methylibium petroleiphilum PM1  Bacteria  normal  0.747799  normal  0.211573 
 
 
-
 
NC_007204  Psyc_0186  hypothetical protein  26.28 
 
 
164 aa  49.7  0.00001  Psychrobacter arcticus 273-4  Bacteria  hitchhiker  0.0000256938  normal  0.169414 
 
 
-
 
NC_013757  Gobs_4934  pyridoxamine 5'-phosphate oxidase-related FMN- binding protein  29.41 
 
 
159 aa  49.7  0.00001  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_011004  Rpal_0214  pyridoxamine 5'-phosphate oxidase-related FMN-binding  25.19 
 
 
162 aa  50.1  0.00001  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.384494  n/a   
 
 
-
 
NC_007925  RPC_0067  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  22.96 
 
 
163 aa  49.3  0.00002  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.663335  normal  0.459209 
 
 
-
 
NC_008541  Arth_0043  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  24.67 
 
 
160 aa  48.1  0.00004  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_013235  Namu_3457  pyridoxamine 5'-phosphate oxidase-related FMN- binding  24.81 
 
 
166 aa  47.8  0.00005  Nakamurella multipartita DSM 44233  Bacteria  hitchhiker  0.00322283  hitchhiker  0.00394331 
 
 
-
 
NC_007406  Nwi_2671  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  27.41 
 
 
180 aa  47.8  0.00006  Nitrobacter winogradskyi Nb-255  Bacteria  normal  0.455745  normal 
 
 
-
 
NC_011886  Achl_0041  pyridoxamine 5'-phosphate oxidase-related FMN-binding  26.89 
 
 
160 aa  47.4  0.00007  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_009621  Smed_5578  pyridoxamine 5'-phosphate oxidase-related FMN-binding  24.32 
 
 
145 aa  47  0.00008  Sinorhizobium medicae WSM419  Bacteria  normal  0.374657  normal  0.0885216 
 
 
-
 
NC_008255  CHU_0468  general stress protein  25 
 
 
165 aa  46.2  0.0001  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  normal 
 
 
-
 
NC_007778  RPB_0323  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  23.13 
 
 
162 aa  46.6  0.0001  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.17098  normal 
 
 
-
 
NC_012803  Mlut_21290  uncharacterized stress protein (general stress protein 26)  28.24 
 
 
160 aa  46.2  0.0001  Micrococcus luteus NCTC 2665  Bacteria  normal  0.967363  n/a   
 
 
-
 
NC_014151  Cfla_2950  pyridoxamine 5'-phosphate oxidase-related FMN- binding protein  27.91 
 
 
171 aa  46.2  0.0001  Cellulomonas flavigena DSM 20109  Bacteria  normal  normal 
 
 
-
 
NC_008009  Acid345_3048  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  23.53 
 
 
159 aa  45.4  0.0002  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal 
 
 
-
 
NC_009441  Fjoh_3362  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  25.74 
 
 
166 aa  43.5  0.0009  Flavobacterium johnsoniae UW101  Bacteria  normal  n/a   
 
 
-
 
NC_007959  Nham_4106  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  23.61 
 
 
163 aa  42.4  0.002  Nitrobacter hamburgensis X14  Bacteria  normal  0.318371  n/a   
 
 
-
 
NC_012848  Rleg_5131  pyridoxamine 5'-phosphate oxidase-related FMN-binding  21.3 
 
 
149 aa  41.6  0.003  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.286688  normal  0.0978012 
 
 
-
 
NC_011368  Rleg2_5427  pyridoxamine 5'-phosphate oxidase-related FMN-binding  21.3 
 
 
149 aa  40.8  0.006  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  decreased coverage  0.0071751  hitchhiker  0.00705549 
 
 
-
 
NC_013169  Ksed_03010  uncharacterized stress protein (general stress protein 26)  26.32 
 
 
146 aa  40.8  0.007  Kytococcus sedentarius DSM 20547  Bacteria  normal  normal 
 
 
-
 
NC_014230  CA2559_13353  possible general stress protein 26  23.21 
 
 
154 aa  40.4  0.009  Croceibacter atlanticus HTCC2559  Bacteria  normal  n/a   
 
 
-
 
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