| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_0214 |
|---|
| Symbol | |
|---|
| ID | 6407858 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris TIE-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011004 |
|---|
| Strand | - |
|---|
| Start bp | 233035 |
|---|
| End bp | 233523 |
|---|
| Gene Length | 489 bp |
|---|
| Protein Length | 162 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 642710122 |
|---|
| Product | pyridoxamine 5'-phosphate oxidase-related FMN-binding |
|---|
| Protein accession | YP_001989250 |
|---|
| Protein GI | 192288645 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3871] Uncharacterized stress protein (general stress protein 26) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.384494 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCGGCGA CGATGAACGA GGGCAACGCA CAGCACGCCT GGGATCTGAT GAAGAAGATC
ACCTTCGCGA TGTTGGCGAC GCGCGACGGC GAAAAGATCC GGTCGCGCCC GATGGCCGCC
TATGTGAGGC CCGAAGAGGG CGCGATCTAC TTCCTCACCG ATGTGCGCCG CCACAAGGAC
GAGGAGATCG CTCAGGATCA CCACGTCAAT CTCGGCTTCG CCAATGCCAG CGCGCAGAAG
TACGTCTCGG TCACCGGCTA TGCGGCGATC AGCGACGACC GCGCCAAGAT CAAGGAGCTG
TTCGGCACTG AGGCCAAGGC GTGGTGGGAC AGCCCGGATG ACCCGAATAT CCGAGTGCTG
AAGGTGACGC CGGAGGAGGC CGAGTATTGG GATTCGCCCG GCAGTCTCAT CAGCTACGCC
AAGATGATGG TGGCCGCCGC CACCGGGAGC CGGCCCGACC TCGGCGAGAA CGCCAAGGTG
GCGATCTAA
|
|---|
| Protein sequence | MAATMNEGNA QHAWDLMKKI TFAMLATRDG EKIRSRPMAA YVRPEEGAIY FLTDVRRHKD
EEIAQDHHVN LGFANASAQK YVSVTGYAAI SDDRAKIKEL FGTEAKAWWD SPDDPNIRVL
KVTPEEAEYW DSPGSLISYA KMMVAAATGS RPDLGENAKV AI
|
|---|
| |