83 homologs were found in PanDaTox collection
for query gene RPD_0477 on replicon NC_007958
Organism: Rhodopseudomonas palustris BisB5



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_007958  RPD_0477  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  100 
 
 		 162 aa  335  9.999999999999999e-92  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.130245  normal  0.542758 
 
 
-
 
NC_007778  RPB_0323  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  92.59 
 
 		 162 aa  316  9e-86  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.17098  normal  1 
 
 
-
 
NC_011004  Rpal_0214  pyridoxamine 5'-phosphate oxidase-related FMN-binding  87.65 
 
 		 162 aa  305  2.0000000000000002e-82  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.384494  n/a   
 
 
-
 
NC_007925  RPC_0067  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  73.46 
 
 		 163 aa  262  1e-69  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.663335  normal  0.459209 
 
 
-
 
NC_009485  BBta_0235  hypothetical protein  63.75 
 
 		 161 aa  227  4e-59  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.0424787  normal  0.647212 
 
 
-
 
NC_012854  Rleg_6338  pyridoxamine 5'-phosphate oxidase-related FMN-binding  61.15 
 
 		 159 aa  209  2e-53  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011368  Rleg2_4578  pyridoxamine 5'-phosphate oxidase-related FMN-binding  58.33 
 
 		 159 aa  201  3e-51  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.208727  normal  1 
 
 
-
 
NC_008254  Meso_3651  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  59.33 
 
 		 159 aa  184  3e-46  Chelativorans sp. BNC1  Bacteria  normal  0.187958  n/a   
 
 
-
 
NC_009972  Haur_1688  pyridoxamine 5'-phosphate oxidase-related FMN-binding  40 
 
 		 165 aa  117  6e-26  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.317072  n/a   
 
 
-
 
NC_007959  Nham_4106  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  36.88 
 
 		 163 aa  111  4.0000000000000004e-24  Nitrobacter hamburgensis X14  Bacteria  normal  0.318371  n/a   
 
 
-
 
NC_013730  Slin_0757  pyridoxamine 5'-phosphate oxidase-related FMN- binding protein  45.33 
 
 		 167 aa  110  9e-24  Spirosoma linguale DSM 74  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007406  Nwi_2671  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  34.57 
 
 		 180 aa  109  1.0000000000000001e-23  Nitrobacter winogradskyi Nb-255  Bacteria  normal  0.455745  normal  1 
 
 
-
 
NC_013730  Slin_0534  pyridoxamine 5'-phosphate oxidase-related FMN- binding protein  38.67 
 
 		 170 aa  103  1e-21  Spirosoma linguale DSM 74  Bacteria  normal  1  normal  0.536525 
 
 
-
 
NC_010511  M446_0415  pyridoxamine 5'-phosphate oxidase-related FMN-binding  39.6 
 
 		 169 aa  97.8  5e-20  Methylobacterium sp. 4-46  Bacteria  normal  1  normal  0.0380541 
 
 
-
 
NC_010505  Mrad2831_2143  pyridoxamine 5'-phosphate oxidase-related FMN-binding  36.48 
 
 		 167 aa  97.8  6e-20  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.429446  normal  1 
 
 
-
 
NC_011894  Mnod_1723  pyridoxamine 5'-phosphate oxidase-related FMN-binding  35.48 
 
 		 169 aa  96.7  1e-19  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.0380368  n/a   
 
 
-
 
NC_010725  Mpop_5080  pyridoxamine 5'-phosphate oxidase-related FMN-binding  35.9 
 
 		 167 aa  95.5  2e-19  Methylobacterium populi BJ001  Bacteria  normal  1  normal  0.71556 
 
 
-
 
NC_010172  Mext_4563  pyridoxamine 5'-phosphate oxidase-related FMN-binding  35.26 
 
 		 167 aa  95.9  2e-19  Methylobacterium extorquens PA1  Bacteria  normal  0.535991  normal  0.356279 
 
 
-
 
NC_011757  Mchl_5023  pyridoxamine 5'-phosphate oxidase-related FMN-binding  34.62 
 
 		 167 aa  94.4  6e-19  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.140709  normal  0.115662 
 
 
-
 
NC_008255  CHU_0468  general stress protein  33.13 
 
 		 165 aa  91.7  3e-18  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011071  Smal_1439  pyridoxamine 5'-phosphate oxidase-related FMN-binding  37.91 
 
 		 165 aa  92  3e-18  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.123209  normal  1 
 
 
-
 
NC_009441  Fjoh_3362  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  35.66 
 
 		 166 aa  91.7  4e-18  Flavobacterium johnsoniae UW101  Bacteria  normal  1  n/a   
 
 
-
 
NC_013132  Cpin_6715  pyridoxamine 5'-phosphate oxidase-related FMN- binding  36.3 
 
 		 178 aa  90.5  9e-18  Chitinophaga pinensis DSM 2588  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008025  Dgeo_0891  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  36.42 
 
 		 169 aa  90.1  1e-17  Deinococcus geothermalis DSM 11300  Bacteria  normal  1  normal  0.457578 
 
 
-
 
NC_007614  Nmul_A2175  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  35.42 
 
 		 169 aa  87.8  6e-17  Nitrosospira multiformis ATCC 25196  Bacteria  normal  1  n/a   
 
 
-
 
NC_013757  Gobs_4934  pyridoxamine 5'-phosphate oxidase-related FMN- binding protein  37.34 
 
 		 159 aa  87  9e-17  Geodermatophilus obscurus DSM 43160  Bacteria  normal  1  n/a   
 
 
-
 
NC_014151  Cfla_2950  pyridoxamine 5'-phosphate oxidase-related FMN- binding protein  40.13 
 
 		 171 aa  86.7  1e-16  Cellulomonas flavigena DSM 20109  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008825  Mpe_A2178  uncharacterized stress protein  35 
 
 		 194 aa  87  1e-16  Methylibium petroleiphilum PM1  Bacteria  normal  0.747799  normal  0.211573 
 
 
-
 
NC_010717  PXO_00185  general stress protein  36.91 
 
 		 166 aa  85.9  2e-16  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.78634  n/a   
 
 
-
 
NC_008752  Aave_0014  putative general stress protein 26  33.54 
 
 		 165 aa  84.7  5e-16  Acidovorax citrulli AAC00-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008255  CHU_2296  general stress protein  33.83 
 
 		 186 aa  84.3  6e-16  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  1  normal  0.0248237 
 
 
-
 
NC_013037  Dfer_4832  pyridoxamine 5'-phosphate oxidase-related FMN- binding  34.64 
 
 		 166 aa  84.3  6e-16  Dyadobacter fermentans DSM 18053  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008782  Ajs_4161  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  34.57 
 
 		 168 aa  84  7e-16  Acidovorax sp. JS42  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011992  Dtpsy_0017  pyridoxamine 5'-phosphate oxidase-related FMN-binding  34.57 
 
 		 168 aa  84  7e-16  Acidovorax ebreus TPSY  Bacteria  normal  0.0687493  n/a   
 
 
-
 
NC_011886  Achl_0041  pyridoxamine 5'-phosphate oxidase-related FMN-binding  34.01 
 
 		 160 aa  79.7  0.00000000000001  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal  1 
 
 
-
 
NC_013235  Namu_3457  pyridoxamine 5'-phosphate oxidase-related FMN- binding  31.85 
 
 		 166 aa  79.3  0.00000000000002  Nakamurella multipartita DSM 44233  Bacteria  hitchhiker  0.00322283  hitchhiker  0.00394331 
 
 
-
 
NC_014248  Aazo_1306  pyridoxamine 5'-phosphate oxidase-like FMN-binding protein  32.61 
 
 		 153 aa  78.6  0.00000000000003  'Nostoc azollae' 0708  Bacteria  normal  1  n/a   
 
 
-
 
NC_013132  Cpin_1506  pyridoxamine 5'-phosphate oxidase-related FMN- binding  30.46 
 
 		 167 aa  79  0.00000000000003  Chitinophaga pinensis DSM 2588  Bacteria  hitchhiker  0.00738794  normal  1 
 
 
-
 
NC_008541  Arth_0043  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  34.48 
 
 		 160 aa  77.4  0.00000000000008  Arthrobacter sp. FB24  Bacteria  normal  1  n/a   
 
 
-
 
NC_014230  CA2559_13353  possible general stress protein 26  32.85 
 
 		 154 aa  77.4  0.00000000000009  Croceibacter atlanticus HTCC2559  Bacteria  normal  1  n/a   
 
 
-
 
NC_013061  Phep_2509  hypothetical protein  34.17 
 
 		 178 aa  72.8  0.000000000002  Pedobacter heparinus DSM 2366  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013521  Sked_36910  uncharacterized stress protein (general stress protein 26)  30.07 
 
 		 161 aa  72.8  0.000000000002  Sanguibacter keddieii DSM 10542  Bacteria  normal  1  normal  0.408882 
 
 
-
 
NC_007413  Ava_4901  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  30.28 
 
 		 152 aa  72.8  0.000000000002  Anabaena variabilis ATCC 29413  Bacteria  hitchhiker  0.00000931865  normal  0.0570738 
 
 
-
 
NC_009524  PsycPRwf_0544  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  30.26 
 
 		 164 aa  72.4  0.000000000003  Psychrobacter sp. PRwf-1  Bacteria  decreased coverage  0.000110488  unclonable  0.00000000107777 
 
 
-
 
NC_013440  Hoch_6194  pyridoxamine 5'-phosphate oxidase-related FMN- binding protein  30.67 
 
 		 167 aa  71.6  0.000000000004  Haliangium ochraceum DSM 14365  Bacteria  decreased coverage  0.000117715  normal  1 
 
 
-
 
NC_007204  Psyc_0186  hypothetical protein  28.83 
 
 		 164 aa  71.2  0.000000000006  Psychrobacter arcticus 273-4  Bacteria  hitchhiker  0.0000256938  normal  0.169414 
 
 
-
 
NC_008009  Acid345_3048  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  30.87 
 
 		 159 aa  71.2  0.000000000006  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007969  Pcryo_0207  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  28.29 
 
 		 164 aa  70.9  0.000000000008  Psychrobacter cryohalolentis K5  Bacteria  hitchhiker  0.0000595835  normal  1 
 
 
-
 
NC_012803  Mlut_21290  uncharacterized stress protein (general stress protein 26)  30.2 
 
 		 160 aa  68.9  0.00000000002  Micrococcus luteus NCTC 2665  Bacteria  normal  0.967363  n/a   
 
 
-
 
NC_013169  Ksed_03010  uncharacterized stress protein (general stress protein 26)  30.41 
 
 		 146 aa  68.2  0.00000000005  Kytococcus sedentarius DSM 20547  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008688  Pden_4608  putative general stress protein 26  29.22 
 
 		 160 aa  67  0.0000000001  Paracoccus denitrificans PD1222  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013172  Bfae_04320  uncharacterized stress protein (general stress protein 26)  30.43 
 
 		 162 aa  64.7  0.0000000005  Brachybacterium faecium DSM 4810  Bacteria  normal  1  n/a   
 
 
-
 
NC_010338  Caul_3141  general stress protein  28.36 
 
 		 161 aa  62.4  0.000000003  Caulobacter sp. K31  Bacteria  normal  1  normal  0.0462992 
 
 
-
 
NC_007760  Adeh_3400  FMN-binding pyridoxamine 5'-phosphate oxidase-related protein  35.54 
 
 		 151 aa  55.1  0.0000004  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  1  n/a   
 
 
-
 
NC_011891  A2cp1_3547  pyridoxamine 5'-phosphate oxidase-related FMN-binding  35.54 
 
 		 153 aa  54.7  0.0000005  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_011145  AnaeK_3483  pyridoxamine 5'-phosphate oxidase-related FMN-binding  35.54 
 
 		 153 aa  54.7  0.0000005  Anaeromyxobacter sp. K  Bacteria  normal  1  n/a   
 
 
-
 
NC_011989  Avi_3632  hypothetical protein  23.72 
 
 		 167 aa  52.4  0.000003  Agrobacterium vitis S4  Bacteria  normal  0.963892  n/a   
 
 
-
 
NC_011138  MADE_02295  general stress protein  25.37 
 
 		 146 aa  52  0.000004  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  0.944357  n/a   
 
 
-
 
NC_009428  Rsph17025_1889  hypothetical protein  25.17 
 
 		 165 aa  51.2  0.000006  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.632194  normal  0.504186 
 
 
-
 
NC_009675  Anae109_3465  pyridoxamine 5'-phosphate oxidase-related FMN-binding  31.4 
 
 		 148 aa  50.1  0.00001  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  1  normal  0.0524675 
 
 
-
 
NC_007493  RSP_2384  hypothetical protein  22.67 
 
 		 186 aa  48.5  0.00003  Rhodobacter sphaeroides 2.4.1  Bacteria  decreased coverage  0.00852398  n/a   
 
 
-
 
NC_009049  Rsph17029_1047  hypothetical protein  22.67 
 
 		 186 aa  48.5  0.00003  Rhodobacter sphaeroides ATCC 17029  Bacteria  hitchhiker  0.00624108  normal  0.760938 
 
 
-
 
NC_006694  CNI01580  conserved hypothetical protein  24.82 
 
 		 198 aa  48.5  0.00004  Cryptococcus neoformans var. neoformans JEC21  Eukaryota  normal  1  n/a   
 
 
-
 
NC_010717  PXO_00366  general stress protein  24.44 
 
 		 162 aa  48.1  0.00005  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.222659  n/a   
 
 
-
 
NC_011772  BCG9842_B4840  general stress protein 26  29.31 
 
 		 138 aa  48.1  0.00006  Bacillus cereus G9842  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011725  BCB4264_A0483  general stress protein 26  29.31 
 
 		 138 aa  48.1  0.00006  Bacillus cereus B4264  Bacteria  normal  1  n/a   
 
 
-
 
NC_011369  Rleg2_3213  hypothetical protein  23.19 
 
 		 167 aa  46.6  0.0001  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  1  normal  1 
 
 
-
 
NC_005945  BAS0405  general stress protein 26  28.91 
 
 		 138 aa  46.2  0.0002  Bacillus anthracis str. Sterne  Bacteria  normal  1  n/a   
 
 
-
 
NC_007530  GBAA_0418  general stress protein 26  28.91 
 
 		 138 aa  46.2  0.0002  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  1  n/a   
 
 
-
 
NC_003909  BCE_0533  general stress protein 26  25.86 
 
 		 138 aa  46.2  0.0002  Bacillus cereus ATCC 10987  Bacteria  normal  1  n/a   
 
 
-
 
NC_011658  BCAH187_A0534  general stress protein 26  28.45 
 
 		 138 aa  45.8  0.0002  Bacillus cereus AH187  Bacteria  normal  1  n/a   
 
 
-
 
NC_012848  Rleg_5131  pyridoxamine 5'-phosphate oxidase-related FMN-binding  27.64 
 
 		 149 aa  45.4  0.0003  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.286688  normal  0.0978012 
 
 
-
 
NC_002976  SERP1973  general stress protein 26, putative  25.41 
 
 		 140 aa  45.4  0.0003  Staphylococcus epidermidis RP62A  Bacteria  hitchhiker  0.0000492274  n/a   
 
 
-
 
NC_011773  BCAH820_0464  general stress protein 26  28.57 
 
 		 138 aa  45.1  0.0005  Bacillus cereus AH820  Bacteria  n/a    normal  1 
 
 
-
 
NC_006274  BCZK0392  general stress protein 26  28.57 
 
 		 138 aa  45.1  0.0005  Bacillus cereus E33L  Bacteria  normal  1  n/a   
 
 
-
 
NC_005957  BT9727_0396  general stress protein 26  28.57 
 
 		 138 aa  45.1  0.0005  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  1  n/a   
 
 
-
 
NC_012850  Rleg_3508  hypothetical protein  22.22 
 
 		 167 aa  44.3  0.0006  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  1  normal  0.398913 
 
 
-
 
NC_007802  Jann_0955  putative general stress protein 26  26.11 
 
 		 159 aa  44.3  0.0008  Jannaschia sp. CCS1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009487  SaurJH9_2406  pyridoxamine 5'-phosphate oxidase-related, FMN-binding  28.7 
 
 		 140 aa  43.9  0.0009  Staphylococcus aureus subsp. aureus JH9  Bacteria  normal  0.0218087  n/a   
 
 
-
 
NC_009632  SaurJH1_2453  pyridoxamine 5'-phosphate oxidase-related FMN-binding  28.7 
 
 		 140 aa  43.9  0.0009  Staphylococcus aureus subsp. aureus JH1  Bacteria  normal  0.168439  n/a   
 
 
-
 
NC_009621  Smed_5578  pyridoxamine 5'-phosphate oxidase-related FMN-binding  26.83 
 
 		 145 aa  42.4  0.002  Sinorhizobium medicae WSM419  Bacteria  normal  0.374657  normal  0.0885216 
 
 
-
 
NC_011368  Rleg2_5427  pyridoxamine 5'-phosphate oxidase-related FMN-binding  26.83 
 
 		 149 aa  41.6  0.004  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  decreased coverage  0.0071751  hitchhiker  0.00705549 
 
 
-
 
NC_010184  BcerKBAB4_0398  pyridoxamine 5'-phosphate oxidase-related FMN-binding  26.92 
 
 		 138 aa  40.8  0.007  Bacillus weihenstephanensis KBAB4  Bacteria  normal  1  n/a   
 
 
-
 
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