11 homologs were found in PanDaTox collection
for query gene Shel_04190 on replicon NC_013165
Organism: Slackia heliotrinireducens DSM 20476



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_013165  Shel_04190  transcriptional regulator, tetR family  100 
 
 		 184 aa  382  1e-105  Slackia heliotrinireducens DSM 20476  Bacteria  normal  1  normal  0.584897 
 
 
-
 
NC_013204  Elen_1164  putative transcriptional regulator, TetR family  33.9 
 
 		 198 aa  114  6e-25  Eggerthella lenta DSM 2243  Bacteria  normal  0.296782  normal  1 
 
 
-
 
NC_013204  Elen_0254  hypothetical protein  31.25 
 
 		 188 aa  102  2e-21  Eggerthella lenta DSM 2243  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013165  Shel_11210  transcriptional regulator, tetR family  29.55 
 
 		 203 aa  67.8  0.00000000008  Slackia heliotrinireducens DSM 20476  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011830  Dhaf_2537  putative transcriptional regulator, TetR family  29.14 
 
 		 203 aa  64.3  0.0000000009  Desulfitobacterium hafniense DCB-2  Bacteria  normal  1  n/a   
 
 
-
 
NC_013204  Elen_0969  putative transcriptional regulator, TetR family  27.22 
 
 		 214 aa  60.8  0.00000001  Eggerthella lenta DSM 2243  Bacteria  normal  0.043647  hitchhiker  0.0000349278 
 
 
-
 
NC_011830  Dhaf_1714  hypothetical protein  29.25 
 
 		 152 aa  47.8  0.00009  Desulfitobacterium hafniense DCB-2  Bacteria  normal  1  n/a   
 
 
-
 
NC_007953  Bxe_C0628  TetR family transcriptional regulator  42.11 
 
 		 262 aa  43.1  0.002  Burkholderia xenovorans LB400  Bacteria  normal  1  normal  0.0323336 
 
 
-
 
NC_009077  Mjls_4182  TetR family transcriptional regulator  29.13 
 
 		 201 aa  42.4  0.003  Mycobacterium sp. JLS  Bacteria  normal  0.368627  normal  1 
 
 
-
 
NC_011898  Ccel_2161  transcriptional regulator, TetR family  27.84 
 
 		 204 aa  42  0.005  Clostridium cellulolyticum H10  Bacteria  normal  1  n/a   
 
 
-
 
NC_009719  Plav_0651  TetR family transcriptional regulator  27.42 
 
 		 218 aa  41.6  0.007  Parvibaculum lavamentivorans DS-1  Bacteria  decreased coverage  0.0025795  normal  0.249536 
 
 
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