Gene Shel_11210 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_11210 
Symbol 
ID8395012 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp1278059 
End bp1278670 
Gene Length612 bp 
Protein Length203 aa 
Translation table11 
GC content51% 
IMG OID644985879 
Producttranscriptional regulator, tetR family 
Protein accessionYP_003143505 
Protein GI257063833 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCAACG CGATTCCTGG CAACGACTTT GACCTGTCTA CCATTCGAAA GCTTCTTATC 
ATCCGGGCTG TAGAGCAACT CATGGACGAG GTATCCTTCG ACGACCTGAC GGTCAAAATG
ATCTGCGAAA AAGTCGAGAT TTCCCGACAG ACGTTCTATC GGCATTTTCA AGACAAATAC
GATATGGCCC CTTGGTATTG GAACCTCATC GCCAACGAAT ATCTCGCGAA AACCGGATGC
GGGCTGAGCT GGTACGAAGG CAACTACTAT ATGCTCTGCA CCTTCAAGGA GCACCAGAAC
TTCTTCACGT ATTTCTATCG TACCGATTCC CATGAATACG GCATTTTCCG TAAGCACAGC
TTTCGCCAGA GGTCGAGCTT CCTGAAAGAA ACCATCGTGG GCGTGCTGGG GAAAGACGCC
CTCACGCCTG ACCTCGAGTT TCAAATCGAG TTTTTCGCTG ACGCCGAGTC TCGTGAAGTA
GAGCGCTGGA CCATGCGCGG CATGGACACG CCGCCCGAGC GTATGGCCGA GCTTTTTGAG
AAGTGCGTAC CTCCTGAGCT GCACGAAGCA ATTGAACGCG CCGAGAAAAT CGTAATCGCC
CAAAACCATT AG
 
Protein sequence
MINAIPGNDF DLSTIRKLLI IRAVEQLMDE VSFDDLTVKM ICEKVEISRQ TFYRHFQDKY 
DMAPWYWNLI ANEYLAKTGC GLSWYEGNYY MLCTFKEHQN FFTYFYRTDS HEYGIFRKHS
FRQRSSFLKE TIVGVLGKDA LTPDLEFQIE FFADAESREV ERWTMRGMDT PPERMAELFE
KCVPPELHEA IERAEKIVIA QNH