Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Elen_0969 |
Symbol | |
ID | 8415259 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Eggerthella lenta DSM 2243 |
Kingdom | Bacteria |
Replicon accession | NC_013204 |
Strand | - |
Start bp | 1175822 |
End bp | 1176466 |
Gene Length | 645 bp |
Protein Length | 214 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 645023933 |
Product | putative transcriptional regulator, TetR family |
Protein accession | YP_003181330 |
Protein GI | 257790724 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.043647 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.0000349278 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCCCAACG ATACGTTCTC CATCATAGCG AAGCGGTTCT TCATCGCGAC GACCGCCAAC GAGCTCTGCA AGAAGACGAG CTTGGACGAG ATCGCCGTCG ACGAGATCTG CGAGACGGCC GGCGTGTCGC GCTCCGGCTT CTACCGCGCG TTCCACAGCA AGTACGACAT CGCCCCCTGG TGCCTGCGGT TCCCCCTCGA GGAGGGCGTC GGCAAGATGG GGCGCTCGCT GACCTGCCAG GAGGGCATCG CCATCACGCT TGAGATATTC GCGCTGTTCA AGGATTTGTT CAACGCCGCG AAGAAAACGT CCGAGATGCT GGTATGCGAC GAGGAGGAGC GCCGCCACGT GGTCGCCCTC ATCCGCGAGA CGCTGGAGAC GCGCCACGGC ACGAGCGTCG ACGAGGCGCT GGCGTTCCAG ATCGAATGGG TGACCGCGGC GGGCCTCGAC GTTTCCGAGG ACTGGATTCG CGGCACCATC GACAAATCGC CCGCCGAGCT GGCCGAGCTG TTTGCCAGCT GCTACCCTCC GCGGCTGCGC AAGCTGCTGG ACGACCCCGT CGACCACGCC GACGACGGCG ATTTCGACCT CAGCAGGTTC GTCGTGTCGA TGTTGAGGCA CGCGCCCGAG GAGACGCAGG CCTGA
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Protein sequence | MPNDTFSIIA KRFFIATTAN ELCKKTSLDE IAVDEICETA GVSRSGFYRA FHSKYDIAPW CLRFPLEEGV GKMGRSLTCQ EGIAITLEIF ALFKDLFNAA KKTSEMLVCD EEERRHVVAL IRETLETRHG TSVDEALAFQ IEWVTAAGLD VSEDWIRGTI DKSPAELAEL FASCYPPRLR KLLDDPVDHA DDGDFDLSRF VVSMLRHAPE ETQA
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