Gene Shel_04190 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_04190 
Symbol 
ID8394311 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp498279 
End bp498833 
Gene Length555 bp 
Protein Length184 aa 
Translation table11 
GC content56% 
IMG OID644985183 
Producttranscriptional regulator, tetR family 
Protein accessionYP_003142829 
Protein GI257063157 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.584897 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCGACA ACTATCTACT GCAGATTCCA GAGGACTTCC AGCGCAAGCT GCGCATTCTG 
CATTCTGTCG ACGGCGCGAA CAGCAACCTC TCCGTTAAGG AAATCTGCCG GCTCAGCGGC
ATATCCCGTT CCACGTTCTA CCGTTACTTC GATTCGCAGG AGGACTTCTG CTACTGGTAC
ATCATTTTCT GCAGCAGCAT CTCGCTGGAC CAGGTGGGGC GCACCCGCAC GTGGAACGAG
GGCATGAAGC ATTTCTACCA GCTGCTTGAG CAGGAGAAAT CCGCGTTGAA GGTATGTGCG
GAATGGAACT CGGATTACGG TGTGGCCTAT ATCGAATCCC ACCGCAAGCA GGTGCTGACG
GAAACCTTAC TGAAGTTCCG CGGCCTGAAG CTGAACGACC TGCTGGAGTT TCAGATAGCT
CACTACATAC GCCTCGAGGT GTGGTCCACC TTCAAATGGC TCCGGTCCAA CAACGCCCAG
CCGGCGAGCA CCTTCGCCGA ACAACTGGAA ACCTGCGTGC CATCCCTGCT GCACGATTCC
CTCTCGCTTT CGTAA
 
Protein sequence
MLDNYLLQIP EDFQRKLRIL HSVDGANSNL SVKEICRLSG ISRSTFYRYF DSQEDFCYWY 
IIFCSSISLD QVGRTRTWNE GMKHFYQLLE QEKSALKVCA EWNSDYGVAY IESHRKQVLT
ETLLKFRGLK LNDLLEFQIA HYIRLEVWST FKWLRSNNAQ PASTFAEQLE TCVPSLLHDS
LSLS