Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shel_04190 |
Symbol | |
ID | 8394311 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Slackia heliotrinireducens DSM 20476 |
Kingdom | Bacteria |
Replicon accession | NC_013165 |
Strand | - |
Start bp | 498279 |
End bp | 498833 |
Gene Length | 555 bp |
Protein Length | 184 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 644985183 |
Product | transcriptional regulator, tetR family |
Protein accession | YP_003142829 |
Protein GI | 257063157 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.584897 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTCGACA ACTATCTACT GCAGATTCCA GAGGACTTCC AGCGCAAGCT GCGCATTCTG CATTCTGTCG ACGGCGCGAA CAGCAACCTC TCCGTTAAGG AAATCTGCCG GCTCAGCGGC ATATCCCGTT CCACGTTCTA CCGTTACTTC GATTCGCAGG AGGACTTCTG CTACTGGTAC ATCATTTTCT GCAGCAGCAT CTCGCTGGAC CAGGTGGGGC GCACCCGCAC GTGGAACGAG GGCATGAAGC ATTTCTACCA GCTGCTTGAG CAGGAGAAAT CCGCGTTGAA GGTATGTGCG GAATGGAACT CGGATTACGG TGTGGCCTAT ATCGAATCCC ACCGCAAGCA GGTGCTGACG GAAACCTTAC TGAAGTTCCG CGGCCTGAAG CTGAACGACC TGCTGGAGTT TCAGATAGCT CACTACATAC GCCTCGAGGT GTGGTCCACC TTCAAATGGC TCCGGTCCAA CAACGCCCAG CCGGCGAGCA CCTTCGCCGA ACAACTGGAA ACCTGCGTGC CATCCCTGCT GCACGATTCC CTCTCGCTTT CGTAA
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Protein sequence | MLDNYLLQIP EDFQRKLRIL HSVDGANSNL SVKEICRLSG ISRSTFYRYF DSQEDFCYWY IIFCSSISLD QVGRTRTWNE GMKHFYQLLE QEKSALKVCA EWNSDYGVAY IESHRKQVLT ETLLKFRGLK LNDLLEFQIA HYIRLEVWST FKWLRSNNAQ PASTFAEQLE TCVPSLLHDS LSLS
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