Gene Elen_1164 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagElen_1164 
Symbol 
ID8415454 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEggerthella lenta DSM 2243 
KingdomBacteria 
Replicon accessionNC_013204 
Strand
Start bp1398230 
End bp1398826 
Gene Length597 bp 
Protein Length198 aa 
Translation table11 
GC content58% 
IMG OID645024126 
Productputative transcriptional regulator, TetR family 
Protein accessionYP_003181523 
Protein GI257790917 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.296782 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGCCGG ATCTTGCTCA TGGACAGGAC ATCTTCGGAT CGCCCGAGCT GCGCACGAAG 
ATGAAGATAC TGCATGCCGT CGACAAATCG CTCGATCGCA TCACGATCGC CGAGATATGC
GAGAACGCGG GAATATCCCG GCAGACGTTC TACCGCCATT TTCAAAGCAA ATACGACATC
CCTTGGTGGC ATTCCATCTT CTGCCGGCAG TTCTACCTCA ACGAGATAGG GCGCACCATC
GATTGGAAGA CAGGGTACTA TCATCATCTC CGGCTTATCG CGCAGGAGCG CGATTTCTAC
CGCAAGTCCA TCCAGTACAG CATCAACACG CCCTTCGGCC AGACCGTTAT GCCCGAGAAC
CGCAAGACGG TGCTGTTGGA GACGCTCGAG AAGTACCGCC ATGTGACCGT GAACGACAAC
ATGCGGTTCA TCGTGGAGAT ATTCTCGAAG CTGGAGTGCG AGGTGCTGAA CGACTGGTTC
CGCTCGGATG CGCCCACCGA CCTCGTGCGT TGGACCGACG ATCTCGTGAG CCTCGTGCCC
GACCGCCTGT ACCGCGCGCT GAGGATCGAC GAGCCGGGTG GAACCTCGGC TGGTTAG
 
Protein sequence
MLPDLAHGQD IFGSPELRTK MKILHAVDKS LDRITIAEIC ENAGISRQTF YRHFQSKYDI 
PWWHSIFCRQ FYLNEIGRTI DWKTGYYHHL RLIAQERDFY RKSIQYSINT PFGQTVMPEN
RKTVLLETLE KYRHVTVNDN MRFIVEIFSK LECEVLNDWF RSDAPTDLVR WTDDLVSLVP
DRLYRALRID EPGGTSAG