14 homologs were found in PanDaTox collection
for query gene Rpic12D_4954 on replicon NC_012855
Organism: Ralstonia pickettii 12D



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_012855  Rpic12D_4954  integrase family protein  100 
 
 		 473 aa  982    Ralstonia pickettii 12D  Bacteria  normal  0.926489  normal  1 
 
 
-
 
NC_012856  Rpic12D_2775  integrase family protein  100 
 
 		 473 aa  982    Ralstonia pickettii 12D  Bacteria  normal  1  normal  0.990262 
 
 
-
 
NC_010676  Bphyt_6478  integrase family protein  42.28 
 
 		 482 aa  318  2e-85  Burkholderia phytofirmans PsJN  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010679  Bphyt_7324  integrase family protein  42.28 
 
 		 482 aa  318  2e-85  Burkholderia phytofirmans PsJN  Bacteria  normal  0.0744771  hitchhiker  0.000888754 
 
 
-
 
NC_010681  Bphyt_0250  integrase family protein  42.28 
 
 		 482 aa  318  2e-85  Burkholderia phytofirmans PsJN  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010627  Bphy_7602  integrase family protein  40.08 
 
 		 482 aa  313  2.9999999999999996e-84  Burkholderia phymatum STM815  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009783  VIBHAR_00537  hypothetical protein  28.89 
 
 		 449 aa  112  1.0000000000000001e-23  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_004578  PSPTO_4744  site-specific recombinase, phage integrase family  24.69 
 
 		 495 aa  91.3  3e-17  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.13628  n/a   
 
 
-
 
NC_008573  Shewana3_4254  phage integrase family protein  23.51 
 
 		 421 aa  81.3  0.00000000000003  Shewanella sp. ANA-3  Bacteria  normal  1  normal  0.0265726 
 
 
-
 
NC_009665  Shew185_4260  phage integrase family protein  28.24 
 
 		 441 aa  81.6  0.00000000000003  Shewanella baltica OS185  Bacteria  normal  1  n/a   
 
 
-
 
NC_009997  Sbal195_4396  integrase family protein  28.24 
 
 		 441 aa  81.6  0.00000000000003  Shewanella baltica OS195  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011663  Sbal223_4222  integrase family protein  24.19 
 
 		 445 aa  64.7  0.000000004  Shewanella baltica OS223  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007954  Sden_3590  transposase, putative  26.75 
 
 		 286 aa  53.1  0.00001  Shewanella denitrificans OS217  Bacteria  normal  1  n/a   
 
 
-
 
NC_009783  VIBHAR_03077  hypothetical protein  26.53 
 
 		 301 aa  51.6  0.00003  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
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