| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_4260 |
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| Symbol | |
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| ID | 5371837 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | + |
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| Start bp | 5077871 |
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| End bp | 5079196 |
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| Gene Length | 1326 bp |
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| Protein Length | 441 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 640832525 |
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| Product | phage integrase family protein |
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| Protein accession | YP_001368439 |
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| Protein GI | 153002758 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 42 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCACAAA TAATACTCTC AAGTGATGTT TATAAGAGCA CAGAATTAAT GCGTAGTGAT
GGCGGTACTT ACAGCTGTCA ACCTTCTAAT GATAATATCG GCCCCGTACC AACCCTCTTT
TCTCATCACG GCATTTTTCT TCACGAACCC AACAGCTATC TTTTTTATCT TAAAGCTATA
AAGAAAGCGA AAGATCTCAG TCCATGTAGC CGAGCATTAC TCAAATACTA TCAATTTCTA
GAGGATGAAA AATTAGATTG GAATTACTTT CCTCCCATAA AAAGGCTTAA GCCCACCTAT
CAATTTCGCT CTTACTTGCT TAAATCAATC AAGCTTGGGG AGTTGGCACA TAGCACTGCA
AACGCATACA TGAACCACGT TAAGAACTTT TATCTGTGGA CCATACACGA AAGATATTTA
AAAGTTCAGA ATGAACAGGA AGCGCCGTTC AAACTAGAGT TTATTCAGAT ACAAAATCAA
GGAATGCTGG CTCATATTAG GCCAACATTT ACAGTTCAAA CTAGTGATCT AAGAATAAAT
GTCCCCAAAG ACAACTACTC AAAGAATATT CGCCCCCTTT CACCACTGAG TCGAGACTCA
ATCGAATTAT TAATTACATT TCTCCCAAAA GTATCCGAAG AATTAAGACT GCAACTTCTT
CTCTCTCTAG ATAGTGGTTT GCGTATTGAA GAAGTCAGTA CATTGACTTT AGATGCGTTA
AAAACGGCGA CGGCAATCTC TGAAAGTCAG CATCGTTTTG AATTGACTTT ATGCCCTAAA
AATACAGGCG TTCAGACCAA ATACGGCAAA AGGCGACGTA TTGAAATCTC TATTTATTTA
CTAGAAGCAC TGCGTGTGTA TCAAATTTCT GAGCGCAGAC TTAATCGCTT AGATAAGTTG
TATTACAAAA TAAATCAACT TACTGATGGT AAGTTATCAC TTCACCATGA CCTAATAGCG
GTGCTCGAAC GATGTCAACG CCACGAACCC TTGTTCATCA GCCAACAAGG CAACCCAATG
ACGAGAGAAT CAATAGAGTC CAGATGGATT GAATTAAGGG CATTGATTCA ACAACAAGAC
AGAGACTTCA AACATCGATT TCACGATTTA AGAGCAACTT ATGCTACCTA CCGTTTAAGT
GATTTGCTTA ATGCTAAGTT AGGCACAATC GAGTCGTTGG AACTACTTAT GGGATGGATG
GGGCACAAAG ATGAAAGCAC CACTTGGAAA TACTTACGAT ACCTCCAGCG AAAAGAAGTT
TTTAAGATGA AATTTGGCAT ACTAGATACC ATCATGCATG AGGCTTTGGG AGTTGATAAT
GAGTAA
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| Protein sequence | MAQIILSSDV YKSTELMRSD GGTYSCQPSN DNIGPVPTLF SHHGIFLHEP NSYLFYLKAI
KKAKDLSPCS RALLKYYQFL EDEKLDWNYF PPIKRLKPTY QFRSYLLKSI KLGELAHSTA
NAYMNHVKNF YLWTIHERYL KVQNEQEAPF KLEFIQIQNQ GMLAHIRPTF TVQTSDLRIN
VPKDNYSKNI RPLSPLSRDS IELLITFLPK VSEELRLQLL LSLDSGLRIE EVSTLTLDAL
KTATAISESQ HRFELTLCPK NTGVQTKYGK RRRIEISIYL LEALRVYQIS ERRLNRLDKL
YYKINQLTDG KLSLHHDLIA VLERCQRHEP LFISQQGNPM TRESIESRWI ELRALIQQQD
RDFKHRFHDL RATYATYRLS DLLNAKLGTI ESLELLMGWM GHKDESTTWK YLRYLQRKEV
FKMKFGILDT IMHEALGVDN E
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