Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_2775 |
Symbol | |
ID | 8020446 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | + |
Start bp | 2938769 |
End bp | 2940190 |
Gene Length | 1422 bp |
Protein Length | 473 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 644831562 |
Product | integrase family protein |
Protein accession | YP_002982718 |
Protein GI | 241664358 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.990262 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTCAAA CGCCATCTGT CTACACGCTC CCTATCTTCC GGAATACCCA GGTTGCTGAT GAACCGGCAC CTGGACGCAT CCCCGTAGAC CATCAGGTAA AAGGGGAACG GGTCAAGTAT TGGCGCGAGT TGCGTGCCTC CAAGACAGTG AAATGGGAGA CGTTCCCGCA CTTCCCTCTG GTGCTCAATG CCGACGGATC ACCGTGGGCC CCTGCCTGCC TGTGGTTGTT AGATCGTGCG CGGGCCAGAC CCCACAAGGT GTCCTCGCTC AATCCCGTTG CGCAAGGGCT GCGGGCCTAC AAGCAGTTCC TCGATGAATT TGGGCTCCAG TGGGACGACT TCTCCGCGGT CGACAAATAC CTGCGCCCAA CCTACCACTA CAAGACCCAC CTCCAAGGTC TGATTAACAG CGGCGCAATC AAACACAGCA CGGCCAGTAG CCGCATGCAG ACGGTGGTGG GCTTCTACCG GTTTCTAATG GAGAGTGAAC GACTGGGCTT CCGCCCTCAG AACGCCCCAT GGGTTGATCG GACAGTCGGC CTTGAATACC GCGACAGCAA GGGTTTCAAG CAGATCAAGG AGGTGACGGC GACCGACGTA TCCATCAGGG TTCCGAAGCG GGACTACGCA TGGGATCGCC GGATCGATGA CGGCGGAAAG CTGCTGCCAC TCTCCCGGCA TGAGCAGAAG ACACTGGTCA AAGCGCTGAA GCTGCTCGGC AATCGCGACT ACGAGCTGAT GCACTACACC GCGCTCCTGA CCGGCGCGCG GATCCAGACC GTCCTGACAC TGCGTTGGGG CGATTTCGCG ACGCCGCCGA GCCAAATCAA CCAGTGGCCG TTCAAGCTGC AATGCGGACC AGGGACAGGT ATCGACACCA AAGGCGATGT GCCGGATGTG CACCTGTCGG TGCAGAAGGA CCTCTACGAA TGGCTACATA TCTACGCTGT CTCTGACCGT GCCGGGTCTA GACGTGAGAA GTCCAACCTC AAGCAGGACC CAATGAACTA TCTGTTCCTG TCCAGTCAAG GTGGCCCCCA TTACGAATCC AAGGCTGATC GCAACGCCCT TTGGGATTCC GCCGAACCGC CGCTGAAGCG CTCGTCTCCG ACTGGACAGA ACCTCCGGTC CTTCATCACG GACTACGTGA TCCCTGAGAT CCGCAAGACG ATCCCGGCCT TCCACTATCA GTTCCATGAC CTGCGGGCCA CCTTTGGAGT CAACTGGGTC GACGCGGTCA TGAGGAACCA AGACACGCGC CAGCGTTACA TCTGGACTCG AGACCAACTC CGTAAACTCA TGTGGCACAA AAGGCCAACC ACGACGGATC TGTACATCGA CTACCGCCAG CACACTGAAC TCCTCGAAAA GGCCGAGGCT GACTGGAACC ACAATCTACT CGACCTCATT CGCTCAGCCT AA
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Protein sequence | MSQTPSVYTL PIFRNTQVAD EPAPGRIPVD HQVKGERVKY WRELRASKTV KWETFPHFPL VLNADGSPWA PACLWLLDRA RARPHKVSSL NPVAQGLRAY KQFLDEFGLQ WDDFSAVDKY LRPTYHYKTH LQGLINSGAI KHSTASSRMQ TVVGFYRFLM ESERLGFRPQ NAPWVDRTVG LEYRDSKGFK QIKEVTATDV SIRVPKRDYA WDRRIDDGGK LLPLSRHEQK TLVKALKLLG NRDYELMHYT ALLTGARIQT VLTLRWGDFA TPPSQINQWP FKLQCGPGTG IDTKGDVPDV HLSVQKDLYE WLHIYAVSDR AGSRREKSNL KQDPMNYLFL SSQGGPHYES KADRNALWDS AEPPLKRSSP TGQNLRSFIT DYVIPEIRKT IPAFHYQFHD LRATFGVNWV DAVMRNQDTR QRYIWTRDQL RKLMWHKRPT TTDLYIDYRQ HTELLEKAEA DWNHNLLDLI RSA
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