| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_4254 |
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| Symbol | |
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| ID | 4475847 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008573 |
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| Strand | - |
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| Start bp | 131864 |
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| End bp | 133129 |
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| Gene Length | 1266 bp |
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| Protein Length | 421 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 639720611 |
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| Product | phage integrase family protein |
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| Protein accession | YP_863769 |
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| Protein GI | 117676193 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.0265726 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCGTTA ACGATTTTTG CATTCGAGAA GTTAAGGTTT ATCGTGATCC TGAGCTAGCT
CTATCGATCG ATAAGGAAAC TGGCGAAGAA ATTTTAAAGT TAGCTGAACT TGAAAATCAG
GAAAAAATAG CTGTTCACGT ATTACTAGAT CCTGAGGGAC GGTTGGTAAA GCCCGCATGT
TTATATCTCT ATTGGAAAAA GGATGAAGAG CAGGCCAAGA GCACCGCTAC AGATGCTAAA
GCGCTGCTGC TCTATTTCAG ATTTCTCCAT CAAAACAACC TCAATTATTG GCAGTTTCCT
CATTCAAAAA GTCGTAAGCA GACATTTAGG TTTGCTGATT TCTTAGTGAG TGCCATTCAA
TCTGACGACA TAGCAATATC AACGGCTAAA ACCTACCTGA GAGTGATAGT TAACTTCTAC
AAATTTTTGG GAAGGAACAA TCTAATTGAG TTTTCAGAAC GGAACAAACC CTTTGACTTC
GAAATAGTGT CTTTACGTCA ATCAGGGATG TTGGCCCACA CTCAACGAGT CATCACCGTA
CAGACCACCA ACTTGATGAA AAAGCTTCCC AAGGAACAGG CAAAGCACAT TAGTAGGAAG
CTTTCGCCTT TAACACAGGA ACATTTGAGC GCATTTCTGG ATACCCTCTC AACAATACCT
GAAGACAAAG CTTTGGTTTT TGAAGTCGCT CTAGCTACAG GAATGCGATT ACAGGAGGTG
CTCACTATTC CTGAGTCAAT AATTTTTAAC CCTGAAAATA CCTATCCAAT TCCCATATCA
ATAGGCCCCC AAAACGGTGT AAAAACAAAA TTTAGCAAAC AGCGTTACGT CGAATTCTCT
GCATCACTGA TGCTTAAACT CCATCAATAT ATGTGGTCTT CAGTTAGACA GAGATATGTT
TCTAAGGGAA AAAATAACGA AGGAAAATTG TTTATTAGTC GTCAGGGAAC GCCATTTAAC
GCCAATACCA TTGAAAAATC ATTTTCGGAT ATCCGACGTG TTCTTTCGCA ACGGTATATG
GATTTTAACT ATGCTATTCA TGATTTACGG TCAACCTATG CAACCTATAC TCTGCATCGA
CTTTGGGAAG AGAAAGGCAG TCTCCGAGCT GCGGCATCAA TTCTTCAAGA ACTGATGGGG
CACAACAGTT TTACATCAAC ATTCAAATAT GTGGAGTTTA TTGAGGCGAA TGCTTTGATG
CTAGATCACG CGCAACATAT GAGTGATGTA TTTCAAATAT TTGGTGGCAG TAATGACGAA
AAGTAA
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| Protein sequence | MIVNDFCIRE VKVYRDPELA LSIDKETGEE ILKLAELENQ EKIAVHVLLD PEGRLVKPAC
LYLYWKKDEE QAKSTATDAK ALLLYFRFLH QNNLNYWQFP HSKSRKQTFR FADFLVSAIQ
SDDIAISTAK TYLRVIVNFY KFLGRNNLIE FSERNKPFDF EIVSLRQSGM LAHTQRVITV
QTTNLMKKLP KEQAKHISRK LSPLTQEHLS AFLDTLSTIP EDKALVFEVA LATGMRLQEV
LTIPESIIFN PENTYPIPIS IGPQNGVKTK FSKQRYVEFS ASLMLKLHQY MWSSVRQRYV
SKGKNNEGKL FISRQGTPFN ANTIEKSFSD IRRVLSQRYM DFNYAIHDLR STYATYTLHR
LWEEKGSLRA AASILQELMG HNSFTSTFKY VEFIEANALM LDHAQHMSDV FQIFGGSNDE
K
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