| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_4954 |
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| Symbol | |
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| ID | 8017235 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012855 |
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| Strand | + |
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| Start bp | 242642 |
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| End bp | 244063 |
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| Gene Length | 1422 bp |
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| Protein Length | 473 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 644828642 |
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| Product | integrase family protein |
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| Protein accession | YP_002979842 |
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| Protein GI | 241589817 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.926489 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTCAAA CGCCATCTGT CTACACGCTC CCTATCTTCC GGAATACCCA GGTTGCTGAT
GAACCGGCAC CTGGACGCAT CCCCGTAGAC CATCAGGTAA AAGGGGAACG GGTCAAGTAT
TGGCGCGAGT TGCGTGCCTC CAAGACAGTG AAATGGGAGA CGTTCCCGCA CTTCCCTCTG
GTGCTCAATG CCGACGGATC ACCGTGGGCC CCTGCCTGCC TGTGGTTGTT AGATCGTGCG
CGGGCCAGAC CCCACAAGGT GTCCTCGCTC AATCCCGTTG CGCAAGGGCT GCGGGCCTAC
AAGCAGTTCC TCGATGAATT TGGGCTCCAG TGGGACGACT TCTCCGCGGT CGACAAATAC
CTGCGCCCAA CCTACCACTA CAAGACCCAC CTCCAAGGTC TGATTAACAG CGGCGCAATC
AAACACAGCA CGGCCAGTAG CCGCATGCAG ACGGTGGTGG GCTTCTACCG GTTTCTAATG
GAGAGTGAAC GACTGGGCTT CCGCCCTCAG AACGCCCCAT GGGTTGATCG GACAGTCGGC
CTTGAATACC GCGACAGCAA GGGTTTCAAG CAGATCAAGG AGGTGACGGC GACCGACGTA
TCCATCAGGG TTCCGAAGCG GGACTACGCA TGGGATCGCC GGATCGATGA CGGCGGAAAG
CTGCTGCCAC TCTCCCGGCA TGAGCAGAAG ACACTGGTCA AAGCGCTGAA GCTGCTCGGC
AATCGCGACT ACGAGCTGAT GCACTACACC GCGCTCCTGA CCGGCGCGCG GATCCAGACC
GTCCTGACAC TGCGTTGGGG CGATTTCGCG ACGCCGCCGA GCCAAATCAA CCAGTGGCCG
TTCAAGCTGC AATGCGGACC AGGGACAGGT ATCGACACCA AAGGCGATGT GCCGGATGTG
CACCTGTCGG TGCAGAAGGA CCTCTACGAA TGGCTACATA TCTACGCTGT CTCTGACCGT
GCCGGGTCTA GACGTGAGAA GTCCAACCTC AAGCAGGACC CAATGAACTA TCTGTTCCTG
TCCAGTCAAG GTGGCCCCCA TTACGAATCC AAGGCTGATC GCAACGCCCT TTGGGATTCC
GCCGAACCGC CGCTGAAGCG CTCGTCTCCG ACTGGACAGA ACCTCCGGTC CTTCATCACG
GACTACGTGA TCCCTGAGAT CCGCAAGACG ATCCCGGCCT TCCACTATCA GTTCCATGAC
CTGCGGGCCA CCTTTGGAGT CAACTGGGTC GACGCGGTCA TGAGGAACCA AGACACGCGC
CAGCGTTACA TCTGGACTCG AGACCAACTC CGTAAACTCA TGTGGCACAA AAGGCCAACC
ACGACGGATC TGTACATCGA CTACCGCCAG CACACTGAAC TCCTCGAAAA GGCCGAGGCT
GACTGGAACC ACAATCTACT CGACCTCATT CGCTCAGCCT AA
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| Protein sequence | MSQTPSVYTL PIFRNTQVAD EPAPGRIPVD HQVKGERVKY WRELRASKTV KWETFPHFPL
VLNADGSPWA PACLWLLDRA RARPHKVSSL NPVAQGLRAY KQFLDEFGLQ WDDFSAVDKY
LRPTYHYKTH LQGLINSGAI KHSTASSRMQ TVVGFYRFLM ESERLGFRPQ NAPWVDRTVG
LEYRDSKGFK QIKEVTATDV SIRVPKRDYA WDRRIDDGGK LLPLSRHEQK TLVKALKLLG
NRDYELMHYT ALLTGARIQT VLTLRWGDFA TPPSQINQWP FKLQCGPGTG IDTKGDVPDV
HLSVQKDLYE WLHIYAVSDR AGSRREKSNL KQDPMNYLFL SSQGGPHYES KADRNALWDS
AEPPLKRSSP TGQNLRSFIT DYVIPEIRKT IPAFHYQFHD LRATFGVNWV DAVMRNQDTR
QRYIWTRDQL RKLMWHKRPT TTDLYIDYRQ HTELLEKAEA DWNHNLLDLI RSA
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