10 homologs were found in PanDaTox collection
for query gene Rmet_0191 on replicon NC_007973
Organism: Cupriavidus metallidurans CH34



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_007973  Rmet_0191  putative type-4 fimbrial biogenesis transmembrane protein  100 
 
 		 198 aa  402  1e-111  Cupriavidus metallidurans CH34  Bacteria  normal  1  normal  0.470108 
 
 
-
 
NC_003296  RS05334  putative type-4 fimbrial biogenesis transmembrane protein  59.04 
 
 		 193 aa  177  9e-44  Ralstonia solanacearum GMI1000  Bacteria  normal  1  normal  0.754794 
 
 
-
 
NC_007484  Noc_2273  type IV pilus assembly protein PilX  29.41 
 
 		 182 aa  69.3  0.00000000004  Nitrosococcus oceani ATCC 19707  Bacteria  normal  1  n/a   
 
 
-
 
NC_008463  PA14_60300  type 4 fimbrial biogenesis protein PilX  36.23 
 
 		 199 aa  51.2  0.000009  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  1  hitchhiker  0.000000472809 
 
 
-
 
NC_011901  Tgr7_3226  Tfp pilus assembly protein PilX  27.53 
 
 		 164 aa  51.2  0.000009  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  1  n/a   
 
 
-
 
NC_009656  PSPA7_5193  type 4 fimbrial biogenesis protein PilX  36.23 
 
 		 195 aa  48.9  0.00005  Pseudomonas aeruginosa PA7  Bacteria  normal  0.516522  n/a   
 
 
-
 
NC_007908  Rfer_2662  putative transmembrane protein  24.35 
 
 		 208 aa  45.8  0.0004  Rhodoferax ferrireducens T118  Bacteria  normal  0.116202  n/a   
 
 
-
 
NC_011992  Dtpsy_2538  hypothetical protein  34.09 
 
 		 253 aa  44.7  0.0008  Acidovorax ebreus TPSY  Bacteria  normal  1  n/a   
 
 
-
 
NC_007947  Mfla_2519  hypothetical protein  30.63 
 
 		 202 aa  43.1  0.003  Methylobacillus flagellatus KT  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010524  Lcho_2908  type IV pilus assembly protein PilX  35.62 
 
 		 225 aa  42.7  0.004  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.87506 
 
 
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