Gene PSPA7_5193 details

Gene Information

• Locus tag: PSPA7_5193
• Symbol: pilX
• ID: 5357657
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudomonas aeruginosa PA7
• Kingdom: Bacteria
• Replicon accession: NC_009656
• Strand: +
• Start bp: 5338883
• End bp: 5339470
• Gene Length: 588 bp
• Protein Length: 195 aa
• Translation table: 11
• GC content: 65%
• IMG OID: 640814239
• Product: type 4 fimbrial biogenesis protein PilX
• Protein accession: YP_001350525
• Protein GI: 152987790
• COG category: [N] Cell motility; [U] Intracellular trafficking, secretion, and vesicular transport
• COG ID: [COG4726] Tfp pilus assembly protein PilX

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.516522
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAACCATC CCCTTTCGAA GCAGCGCGGC GCCACCCTGG TCATCGCTTT GGCGATCCTG 
GTGATCGTCA CCCTGCTGGC CGTCTCGAGC ATGCGCGAAG TGGTGCTGGA AAGTCGCATC 
ACCGGCAACG TGATCGAGCA GACCCGCTTG CAGAACGCCG CCGAATCCGG CCTGCGCGAA 
GGCGAACGGC GCTTCGTCAA CACCCTGCGC CCGCCGGAGC CCGGCACCGG CTGCACGGTC 
GACAACATCG CCCGCCCCTG CCTGCTGAAC CTCGCGGCAC TCAACGTGAA GCTGGAGGAC 
GCGCACCAGG ACCCGGTCGG CGTGCTGAAG AACACCGCCA ACGCCTGGAT GGACTACCGC 
GGCAGCGACG TCGCCAACGC GACCACCGCC GGAACGCTCT ACAAGGTCCA GTGGAACAAC 
CTGCCGATCC CCTCGGGCGG CCAGGTCAAC GAAGCGGAAA GCCCGGAATA CGGCAACCTG 
ATGCGCGGTA TCGGCACCTT CTACTACGAG ACCAACAGCG TCGCGCGCAA CCAGACCAAC 
AGCGAGACCG TCCTGCAGAC CGTTCTCGCT CGTCTCTATA CCAACTGA 

 

Protein sequence

MNHPLSKQRG ATLVIALAIL VIVTLLAVSS MREVVLESRI TGNVIEQTRL QNAAESGLRE 
GERRFVNTLR PPEPGTGCTV DNIARPCLLN LAALNVKLED AHQDPVGVLK NTANAWMDYR 
GSDVANATTA GTLYKVQWNN LPIPSGGQVN EAESPEYGNL MRGIGTFYYE TNSVARNQTN 
SETVLQTVLA RLYTN