Gene Noc_2273 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_2273 
Symbol 
ID3705065 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand
Start bp2619976 
End bp2620524 
Gene Length549 bp 
Protein Length182 aa 
Translation table11 
GC content56% 
IMG OID637738752 
Producttype IV pilus assembly protein PilX 
Protein accessionYP_344261 
Protein GI77165736 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG4726] Tfp pilus assembly protein PilX 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACCAA TTTCTATCAT TTCTTCCTCA CAACGGGGCG CCACCCTCAT CATCAGCCTC 
TTGATGCTGC TGGTCATGAC CTTGATTGGG GTCACAGCTA CCCAAACCAC CGCCTTAGAG
GAAAAAATGG CAGGCAACCT AGGTGACCAG AATCTGGCCT TCCAAGCTGC GGAAGCAGCC
TTGCGGGCTG GCGAAGGCTG GCTAGGGCAG CAAACGGATG AACCTGATCC ACAACCCCTG
GGTAGCTGCG GCACCCCCCC CTGCGATCTG GTATGGCAGC TCAATCTCCT CAATGGGGGC
GATTTTGTGG ACATTAATTG GTGGAAAACC GCGGGCGAGG CCCGTATTTA CGGCAATGCC
GCCCTCGCCA AAATAAAAAC CGCGCCCAAA CACTTTGTCG AATACCATTC CTTTATCAGA
AACGGCCTTA CCCTGGGCAA GCAAAGCGAT GAAGTGGGAC GGCATGTCTA CCGGGTGACC
GCCCGGGGAA CCGGGGGAAC AGACCAGGCC CAGGCCATTC TCCAGACCAC CTATACCCGC
CGTTTCTAA
 
Protein sequence
MKPISIISSS QRGATLIISL LMLLVMTLIG VTATQTTALE EKMAGNLGDQ NLAFQAAEAA 
LRAGEGWLGQ QTDEPDPQPL GSCGTPPCDL VWQLNLLNGG DFVDINWWKT AGEARIYGNA
ALAKIKTAPK HFVEYHSFIR NGLTLGKQSD EVGRHVYRVT ARGTGGTDQA QAILQTTYTR
RF