Gene Rfer_2662 details

Gene Information

• Locus tag: Rfer_2662
• ID: 3960969
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodoferax ferrireducens T118
• Kingdom: Bacteria
• Replicon accession: NC_007908
• Strand: +
• Start bp: 2929012
• End bp: 2929638
• Gene Length: 627 bp
• Protein Length: 208 aa
• Translation table: 11
• GC content: 58%
• IMG OID: 637917480
• Product: putative transmembrane protein
• Protein accession: YP_523909
• Protein GI: 89901438
• COG category: [N] Cell motility; [U] Intracellular trafficking, secretion, and vesicular transport
• COG ID: [COG4726] Tfp pilus assembly protein PilX

Plasmid Coverage information

• Num covering plasmid clones: 11
• Plasmid unclonability p-value: 0.116202
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAGTACC CACCTCTAGC ATTCTTTCGC AGCGCGACAG TACGTGTGCG CAGCAAGCAG 
CGCGGATTTT CCCTCATCAC CACGCTGATA CTGCTCATCG TGGTCACGGT GCTGGGTATC 
GGCGCGAGCC AGATGGTGTT GCTGTCCGAG CGCGCGACCC GGTTTGACCG CGACACGCAA 
ATCGCTTTTC AGGCGGCAGA AGCCGCACTG ATTGACGCGG AATTCGATAT CCGCGGCCCC 
AACACATCGA CCACCCAGCG TGTGGCCTCA TTTTCAGCCA GCAGCGAGCT TGGTTTTATG 
GACGGTTGCG GCACCGGTGC CTCGCTGGGC TTGTGTTTGC CCGCGGCCGA TGGTCAAAAG 
CCGATCTGGT ATTCCGTGGA TTTCACCGAC GAGAGCAGCA GCGCCAAAAC CGTGAAATTT 
GGTGACTTCA CTGGCCGAAC CTTTGCCACC GGAACAAGTG GGATTCGTCC AGAAATAGCC 
CCGCGGTACA TCATCGAAGT ACTGCCCGAC AAGACGCCTG GCCGCAGTGC CAGCGCGCAA 
AAAACTCTGT TCCGTGTGAC GGCCATGGGC TTCGGGCCAC GCAAGGAAAC CCAGGCCGTG 
GTGCAAATGA TATTTAGAAA AGAGTGA 

 

Protein sequence

MKYPPLAFFR SATVRVRSKQ RGFSLITTLI LLIVVTVLGI GASQMVLLSE RATRFDRDTQ 
IAFQAAEAAL IDAEFDIRGP NTSTTQRVAS FSASSELGFM DGCGTGASLG LCLPAADGQK 
PIWYSVDFTD ESSSAKTVKF GDFTGRTFAT GTSGIRPEIA PRYIIEVLPD KTPGRSASAQ 
KTLFRVTAMG FGPRKETQAV VQMIFRKE