11 homologs were found in PanDaTox collection
for query gene Rfer_0540 on replicon NC_007908
Organism: Rhodoferax ferrireducens T118



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_007908  Rfer_0540  hypothetical protein  100 
 
 		 165 aa  302  2.0000000000000002e-81  Rhodoferax ferrireducens T118  Bacteria  normal  1  n/a   
 
 
-
 
NC_007948  Bpro_1327  hypothetical protein  55.35 
 
 		 167 aa  137  7.999999999999999e-32  Polaromonas sp. JS666  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008781  Pnap_0758  hypothetical protein  53.66 
 
 		 167 aa  134  5e-31  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.944138  normal  0.137866 
 
 
-
 
NC_008752  Aave_0919  hypothetical protein  43.43 
 
 		 217 aa  109  2.0000000000000002e-23  Acidovorax citrulli AAC00-1  Bacteria  normal  0.264714  normal  0.433387 
 
 
-
 
NC_012791  Vapar_1075  hypothetical protein  50 
 
 		 172 aa  100  1e-20  Variovorax paradoxus S110  Bacteria  normal  1  n/a   
 
 
-
 
NC_008786  Veis_3527  hypothetical protein  45.41 
 
 		 197 aa  94.7  5e-19  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.0359597  normal  0.934292 
 
 
-
 
NC_008782  Ajs_0669  hypothetical protein  51.59 
 
 		 181 aa  91.7  4e-18  Acidovorax sp. JS42  Bacteria  normal  1  normal  0.252415 
 
 
-
 
NC_008825  Mpe_A3134  general secretion pathway protein M  37.32 
 
 		 168 aa  84  8e-16  Methylibium petroleiphilum PM1  Bacteria  normal  1  normal  0.013923 
 
 
-
 
NC_010524  Lcho_3425  general secretion pathway M protein  39.24 
 
 		 170 aa  83.6  0.000000000000001  Leptothrix cholodnii SP-6  Bacteria  n/a    hitchhiker  0.0000548407 
 
 
-
 
NC_011992  Dtpsy_0648  hypothetical protein  50.63 
 
 		 181 aa  82.8  0.000000000000002  Acidovorax ebreus TPSY  Bacteria  normal  0.0243337  n/a   
 
 
-
 
NC_010002  Daci_5695  hypothetical protein  46.38 
 
 		 186 aa  77.8  0.00000000000006  Delftia acidovorans SPH-1  Bacteria  normal  1  normal  0.0427394 
 
 
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