Gene Daci_5695 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_5695 
Symbol 
ID5751315 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp6331090 
End bp6331650 
Gene Length561 bp 
Protein Length186 aa 
Translation table11 
GC content73% 
IMG OID641300827 
Producthypothetical protein 
Protein accessionYP_001566708 
Protein GI160901126 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3149] Type II secretory pathway, component PulM 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.0427394 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACATGC GCACATCCCG CCAAAGCCTG GCACCCCTGC GCGCGCGCTG GAATGCCCTG 
GCGCCGCGTG AACAGAACAT GACCCTGCTG GCCGGCGGCG TGGTGGCACT GGCCCTGCTG
TGGTGGGTGG CCCTGGCCCC CGCCCTGCAC AGCCTGCGCA CCGCGCCCGA ACGCCATGCC
CAGGCCGACC GCCAGTTGCG CCAGATGCAG CTGCTGCAGG CCGAGGCCGA GCAGCTGCGC
GGCAACGCAC GCCCCGTGGT CGGCGATGCC AAGGCGCTGC TGCAAAGCTC GCTGTCCGCC
GAACTGGGCG CCTCCGCCCA ATTGAACTGG ATGGGCGACC GCGCACAGAT CACGCTCAAG
GCCGCGCCCG CCGCCGCGCT GGCACGCTGG CTGGCCCAGG TCCGCAGCAA CACCCATGCC
GTTCCGGCCG AGATGAAGCT GGCCCGCAGC GCATCTGCAA GCACTGCCGC CGCCTCCGGC
GCAGCAGGCG CTGCCGATGC CGTGCGCTGG GACGGCAGCC TGGCGCTGGA CCTGCCCGTC
GATCCGTCGC GGGCGCCTTG A
 
Protein sequence
MNMRTSRQSL APLRARWNAL APREQNMTLL AGGVVALALL WWVALAPALH SLRTAPERHA 
QADRQLRQMQ LLQAEAEQLR GNARPVVGDA KALLQSSLSA ELGASAQLNW MGDRAQITLK
AAPAAALARW LAQVRSNTHA VPAEMKLARS ASASTAAASG AAGAADAVRW DGSLALDLPV
DPSRAP