Gene Dtpsy_0648 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtpsy_0648 
Symbol 
ID7384153 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax ebreus TPSY 
KingdomBacteria 
Replicon accessionNC_011992 
Strand
Start bp673293 
End bp673838 
Gene Length546 bp 
Protein Length181 aa 
Translation table11 
GC content77% 
IMG OID643653959 
Producthypothetical protein 
Protein accessionYP_002552128 
Protein GI222109864 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3149] Type II secretory pathway, component PulM 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.0243337 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACACCC GCCCCGCTTC GACCTCGCCC GCGCCGGTTC CCCCTGCGCT GGCCGCGCTG 
CGCGCCCACT GGGCCCGCAT GGCGCCGCGC GAACAGTCCC TGGTGCTGGC CGCCGCGGCC
GTGGTGGGGC TGGCCCTGCT GTGGTGGGTG CTGCTGGCGC CCGCACTGCA GCAGCTGCGC
GGCTCGGGCG CACGCCACGC AGCCGTGGAC GCGCAACTGC AGCGCATGCA GGCCCTGCAG
GCCGAAGCGC TACAGCTCAA GGACGCGCCC CGCCCACCCG GCGGCGAGGC CCTGCGCACG
CTGCAGACCA CGCTGACGCA GCAATTGGGC GCAGCCGCGC AGATGAACGT CGCGGGCGAC
CGCGCCACCG TCACCCTCAA GGGCGCCCCC GCCGAGGCCC TTGCCCAGTG GCTGAACCAG
GCGCGCAGCA CCGCGCGCGC CGTGCCGCTG GAAGCCCGCC TGGTGCACAG CGCCGCGCCC
GCCAACGCCG CCGCGGGCGC TGTCCGCTGG GACGGCACGC TGGTGCTGGC GCTGCCCCCG
CAATAG
 
Protein sequence
MNTRPASTSP APVPPALAAL RAHWARMAPR EQSLVLAAAA VVGLALLWWV LLAPALQQLR 
GSGARHAAVD AQLQRMQALQ AEALQLKDAP RPPGGEALRT LQTTLTQQLG AAAQMNVAGD
RATVTLKGAP AEALAQWLNQ ARSTARAVPL EARLVHSAAP ANAAAGAVRW DGTLVLALPP
Q