Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dtpsy_0648 |
Symbol | |
ID | 7384153 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax ebreus TPSY |
Kingdom | Bacteria |
Replicon accession | NC_011992 |
Strand | - |
Start bp | 673293 |
End bp | 673838 |
Gene Length | 546 bp |
Protein Length | 181 aa |
Translation table | 11 |
GC content | 77% |
IMG OID | 643653959 |
Product | hypothetical protein |
Protein accession | YP_002552128 |
Protein GI | 222109864 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3149] Type II secretory pathway, component PulM |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.0243337 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACACCC GCCCCGCTTC GACCTCGCCC GCGCCGGTTC CCCCTGCGCT GGCCGCGCTG CGCGCCCACT GGGCCCGCAT GGCGCCGCGC GAACAGTCCC TGGTGCTGGC CGCCGCGGCC GTGGTGGGGC TGGCCCTGCT GTGGTGGGTG CTGCTGGCGC CCGCACTGCA GCAGCTGCGC GGCTCGGGCG CACGCCACGC AGCCGTGGAC GCGCAACTGC AGCGCATGCA GGCCCTGCAG GCCGAAGCGC TACAGCTCAA GGACGCGCCC CGCCCACCCG GCGGCGAGGC CCTGCGCACG CTGCAGACCA CGCTGACGCA GCAATTGGGC GCAGCCGCGC AGATGAACGT CGCGGGCGAC CGCGCCACCG TCACCCTCAA GGGCGCCCCC GCCGAGGCCC TTGCCCAGTG GCTGAACCAG GCGCGCAGCA CCGCGCGCGC CGTGCCGCTG GAAGCCCGCC TGGTGCACAG CGCCGCGCCC GCCAACGCCG CCGCGGGCGC TGTCCGCTGG GACGGCACGC TGGTGCTGGC GCTGCCCCCG CAATAG
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Protein sequence | MNTRPASTSP APVPPALAAL RAHWARMAPR EQSLVLAAAA VVGLALLWWV LLAPALQQLR GSGARHAAVD AQLQRMQALQ AEALQLKDAP RPPGGEALRT LQTTLTQQLG AAAQMNVAGD RATVTLKGAP AEALAQWLNQ ARSTARAVPL EARLVHSAAP ANAAAGAVRW DGTLVLALPP Q
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