15 homologs were found in PanDaTox collection
for query gene Reut_C6167 on replicon NC_007336
Organism: Ralstonia eutropha JMP134



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_007336  Reut_C6167  helix-hairpin-helix DNA-binding motif-containing protein  100 
 
 		 89 aa  181  3e-45  Ralstonia eutropha JMP134  Bacteria  normal  0.689241  n/a   
 
 
-
 
NC_007336  Reut_C5997  helix-hairpin-helix DNA-binding motif-containing protein  77.91 
 
 		 104 aa  134  5e-31  Ralstonia eutropha JMP134  Bacteria  normal  1  n/a   
 
 
-
 
NC_008391  Bamb_4541  XRE family transcriptional regulator  46.15 
 
 		 108 aa  62  0.000000003  Burkholderia ambifaria AMMD  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010515  Bcenmc03_5133  XRE family transcriptional regulator  50 
 
 		 111 aa  58.9  0.00000002  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.93216  normal  0.775541 
 
 
-
 
NC_010002  Daci_0283  XRE family transcriptional regulator  51.56 
 
 		 99 aa  58.5  0.00000003  Delftia acidovorans SPH-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010622  Bphy_1067  XRE family transcriptional regulator  50.88 
 
 		 86 aa  57.4  0.00000006  Burkholderia phymatum STM815  Bacteria  normal  1  normal  0.753603 
 
 
-
 
NC_012792  Vapar_5937  transcriptional regulator, XRE family  46.03 
 
 		 108 aa  49.3  0.00002  Variovorax paradoxus S110  Bacteria  normal  0.496478  n/a   
 
 
-
 
NC_008345  Sfri_3656  transcriptional regulator, XRE family protein  38.6 
 
 		 78 aa  43.5  0.001  Shewanella frigidimarina NCIMB 400  Bacteria  normal  1  n/a   
 
 
-
 
NC_009092  Shew_0478  XRE family transcriptional regulator  36.51 
 
 		 78 aa  41.6  0.004  Shewanella loihica PV-4  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010814  Glov_0168  transcriptional regulator, XRE family  39.06 
 
 		 86 aa  41.2  0.004  Geobacter lovleyi SZ  Bacteria  normal  1  n/a   
 
 
-
 
NC_011060  Ppha_2228  transcriptional regulator, XRE family  44.44 
 
 		 109 aa  41.2  0.005  Pelodictyon phaeoclathratiforme BU-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_008321  Shewmr4_3396  XRE family transcriptional regulator  33.85 
 
 		 97 aa  40.8  0.006  Shewanella sp. MR-4  Bacteria  normal  1  hitchhiker  0.00158475 
 
 
-
 
NC_004347  SO_0705  Cro/CI family transcriptional regulator  36.21 
 
 		 97 aa  40.4  0.007  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_008322  Shewmr7_0557  XRE family transcriptional regulator  36.21 
 
 		 78 aa  40.4  0.008  Shewanella sp. MR-7  Bacteria  normal  1  normal  0.948289 
 
 
-
 
NC_011663  Sbal223_0669  transcriptional regulator, XRE family  36.21 
 
 		 78 aa  40.4  0.009  Shewanella baltica OS223  Bacteria  normal  1  normal  1 
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>