12 homologs were found in PanDaTox collection
for query gene Psyc_1307 on replicon NC_007204
Organism: Psychrobacter arcticus 273-4



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007204  Psyc_1307  hypothetical protein  100 
 
 
206 aa  427  1e-119  Psychrobacter arcticus 273-4  Bacteria  decreased coverage  0.00000000000128549  normal 
 
 
-
 
NC_007969  Pcryo_1071  hypothetical protein  85.19 
 
 
189 aa  332  2e-90  Psychrobacter cryohalolentis K5  Bacteria  hitchhiker  0.00010932  normal  0.551694 
 
 
-
 
NC_009524  PsycPRwf_1387  hypothetical protein  61.38 
 
 
176 aa  189  2e-47  Psychrobacter sp. PRwf-1  Bacteria  decreased coverage  0.00000320247  unclonable  0.0000000003628 
 
 
-
 
NC_011071  Smal_0322  protein of unknown function DUF442  33.88 
 
 
166 aa  67.8  0.0000000001  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal  0.185858 
 
 
-
 
NC_004347  SO_0090  hypothetical protein  33.71 
 
 
180 aa  53.1  0.000003  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_011989  Avi_1568  metallo-beta-lactamase superfamily protein  36.59 
 
 
439 aa  48.5  0.00007  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_009767  Rcas_1184  hypothetical protein  29.35 
 
 
165 aa  45.4  0.0006  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.166476  normal  0.631601 
 
 
-
 
NC_008347  Mmar10_2144  hypothetical protein  36.14 
 
 
161 aa  45.1  0.0007  Maricaulis maris MCS10  Bacteria  normal  0.666751  normal  0.423368 
 
 
-
 
NC_009438  Sputcn32_0073  hypothetical protein  29.21 
 
 
178 aa  45.1  0.0007  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_009523  RoseRS_0813  hypothetical protein  27.27 
 
 
165 aa  44.7  0.0009  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_009831  Ssed_4078  hypothetical protein  30.93 
 
 
178 aa  43.9  0.001  Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_010577  XfasM23_1995  hypothetical protein  28 
 
 
431 aa  42  0.006  Xylella fastidiosa M23  Bacteria  normal  0.220897  n/a   
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>