| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_4078 |
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| Symbol | |
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| ID | 5610888 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 4991233 |
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| End bp | 4991769 |
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| Gene Length | 537 bp |
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| Protein Length | 178 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640935033 |
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| Product | hypothetical protein |
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| Protein accession | YP_001475810 |
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| Protein GI | 157377210 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3453] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 65 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACGTG CCATCTTACT CGCAGGTTTA ATCACGGCAA CGAGTGCACA GGCGGAGATT
GTCCCCGACG CACTTCAGGA TATTAAGGCG GTGCAGTTCA ACAGTGCCAA CGTCATAACC
TCCGGACTCC CAAACGAAGC CCAATTTGAA ACCTTGCAGC AAGCCGGTGT CGATCTCGTC
ATCAACCTGA TCCCCGATGG CAACTCAAGC GGCCATGGGG ATGAAGCCAG CCTGGTTGAG
GCGGCGGGTA TGATATATGA GTCCATCTCA GTCGATTGGA AAAAGCCAAG CATAGAAGAT
GTTGAGCAAT TTTTCTCAAT AATGAACACG AATAGAGATA AAGACATCTT GGTCCACTGC
GCCGCCAACT ATCGTGCATC GGCTTTCTAT TACCTCTATC AAGCCACTCA GCTCAAACAA
GACAGCGAAC AACAGAAACA GTTAACCCTT ACCCCATGGG GCGATCTGGA ATCCAGCTTG
AAAGAGTACC CACAATGGCA AGTCCTGATA GAGCAAGTTA AGGCGAAATA CCAATAG
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| Protein sequence | MKRAILLAGL ITATSAQAEI VPDALQDIKA VQFNSANVIT SGLPNEAQFE TLQQAGVDLV
INLIPDGNSS GHGDEASLVE AAGMIYESIS VDWKKPSIED VEQFFSIMNT NRDKDILVHC
AANYRASAFY YLYQATQLKQ DSEQQKQLTL TPWGDLESSL KEYPQWQVLI EQVKAKYQ
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