Gene SO_0090 details

Gene Information

• Locus tag: SO_0090
• ID: 1167988
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella oneidensis MR-1
• Kingdom: Bacteria
• Replicon accession: NC_004347
• Strand: +
• Start bp: 98787
• End bp: 99329
• Gene Length: 543 bp
• Protein Length: 180 aa
• Translation table: 11
• GC content: 44%
• IMG OID: 637342103
• Product: hypothetical protein
• Protein accession: NP_715732
• Protein GI: 24371690
• COG category: [S] Function unknown
• COG ID: [COG3453] Uncharacterized protein conserved in bacteria
• TIGRFAM ID: [TIGR01244] conserved hypothetical protein TIGR01244

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGAAAAA CCGCACTTTC GAGCCTTGTT TTTGCCCTGC TTTTAGGTGC TCCACTTGTG 
AATGCCACTA TTGAATCTGA ATCGTTTGAA AAAATAAAGG AAGTGAGGGC ATTACAGCAG 
CAAGCGCCGC AGTTATTAAG TTCGGGCTTG CTGAGTGAGC AACAGTTTGC CCAGCTTAAA 
CAGGCAGGCG TGGATGTGGT GATCAATCTT ATGCCCGATA GCAGTAAAGA TGCCCATCCA 
GATGAAAGAA AACTCGTGAC TCAGGCCGGA ATGGACTATG TGTATATTCC TGTGGATTGG 
CAAAATCCAA AGGTAGAAGA TGTAGAAGCC TTTTTTGCTG CAATGGAGCA GCATAAGGGA 
AAAGATATTT TAGTTCATTG CCTTGCTAAT TATCGCGCCT CAGCGTTTGC TTATTTATAT 
CAGCTAAAGC AAGGCCAAAA GCCTGAGATA GAAAAGACCA TGGCGCCATG GAATGGGGAG 
TTATCAAGTT ATCCCAAGTG GCAGGCATTG TTAGCGGATG TTAGCCAAAA ATACGGTTTT 
TAA 

 

Protein sequence

MRKTALSSLV FALLLGAPLV NATIESESFE KIKEVRALQQ QAPQLLSSGL LSEQQFAQLK 
QAGVDVVINL MPDSSKDAHP DERKLVTQAG MDYVYIPVDW QNPKVEDVEA FFAAMEQHKG 
KDILVHCLAN YRASAFAYLY QLKQGQKPEI EKTMAPWNGE LSSYPKWQAL LADVSQKYGF