12 homologs were found in PanDaTox collection
for query gene Patl_0284 on replicon NC_008228
Organism: Pseudoalteromonas atlantica T6c



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_008228  Patl_0284  Outer membrane protein-like  100 
 
 		 471 aa  959    Pseudoalteromonas atlantica T6c  Bacteria  hitchhiker  0.000446418  n/a   
 
 
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NC_011138  MADE_00634  outer membrane component of multidrug efflux pump  35.38 
 
 		 476 aa  291  1e-77  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  0.253495  n/a   
 
 
-
 
NC_006368  lpp0285  hypothetical protein  26.82 
 
 		 465 aa  130  3e-29  Legionella pneumophila str. Paris  Bacteria  n/a    n/a   
 
 
-
 
NC_006369  lpl0280  hypothetical protein  26.65 
 
 		 465 aa  130  6e-29  Legionella pneumophila str. Lens  Bacteria  n/a    n/a   
 
 
-
 
NC_009427  Saro_3787  Outer membrane protein-like protein  27.19 
 
 		 462 aa  129  2.0000000000000002e-28  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  0.352992  n/a   
 
 
-
 
NC_014148  Plim_2028  Outer membrane protein-like protein  25.8 
 
 		 617 aa  121  1.9999999999999998e-26  Planctomyces limnophilus DSM 3776  Bacteria  normal  0.950233  n/a   
 
 
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NC_009441  Fjoh_3959  Outer membrane protein-like protein  23.54 
 
 		 472 aa  82  0.00000000000002  Flavobacterium johnsoniae UW101  Bacteria  normal  1  n/a   
 
 
-
 
NC_014230  CA2559_06470  hypothetical protein  22.96 
 
 		 469 aa  80.1  0.00000000000007  Croceibacter atlanticus HTCC2559  Bacteria  normal  0.324894  n/a   
 
 
-
 
NC_010717  PXO_01190  outer membrane component of multidrug efflux pump  25.94 
 
 		 307 aa  79  0.0000000000002  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.188881  n/a   
 
 
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NC_013730  Slin_3997  Outer membrane protein-like protein  22.32 
 
 		 486 aa  70.5  0.00000000006  Spirosoma linguale DSM 74  Bacteria  normal  1  hitchhiker  0.000000000837564 
 
 
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NC_013037  Dfer_0710  outer membrane protein-like protein  21.82 
 
 		 475 aa  65.9  0.000000002  Dyadobacter fermentans DSM 18053  Bacteria  decreased coverage  0.000000105718  normal  0.231109 
 
 
-
 
NC_009439  Pmen_1804  TolC family type I secretion outer membrane protein  22.58 
 
 		 451 aa  45.8  0.001  Pseudomonas mendocina ymp  Bacteria  normal  0.894432  normal  0.601876 
 
 
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