| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_0284 |
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| Symbol | |
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| ID | 4172917 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 330366 |
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| End bp | 331781 |
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| Gene Length | 1416 bp |
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| Protein Length | 471 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 638053283 |
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| Product | Outer membrane protein-like |
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| Protein accession | YP_659870 |
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| Protein GI | 109896615 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.000446418 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTATGGGG TTCTGATAAG TGCTTTAGTT TTACTCGGCT TTTCTGCGTC ATCAGCGGCA
TTTACCTTGC AACAATACTT GTCGTCTGTG GCCAATAACC ATCCAGAAAT TCTCGCAATT
GATGCCACCA CAGGGCAGTA CGGTGCTGAC ATTCAATACG CGGATGGTGC TTATGACGCA
AAACTTGAAC ACAACAGCTT TTCGCGCGTC GCCGGTTATT ATGATGGTTT GCAGGCAAGT
CAAAAGTTCT CTAAGCCTCT TGAAGCATAC AACGCGGAAA TCTTTTCTGA ATACCGTATT
TCTGACGGCG ATTTCCCTGT GTACGAACAA GAGTACGCGA CCCTATCCGG CGGTGAAGCC
TCATTGGGCG TGAAGCTGTC ATTGCTACAA GGCCGCGACA CCGACAAGAA ACGCACCGCC
ATGGCCAGCG CTCGCCTCAA GTATAAAATG TGGAGCGAAG AAGCCAAACT TGCCCAAAGT
GAGTTTTACT ACTCGGCCAT ATTGGCCTAC TTGGATTGGG TAGAAGCCGT TAGTTACTTC
AACAAAATCG AGCAGTTAGT CGCGGTCAGC GTTAATCGCC AAGAGGGCAT AAAAACCCGC
GTCGCAGAAG GCGATGTGGC TGAATTTGAG TTGTTAGAGT TTGAAACCCG ATTACTAGAG
CGTCAATCGT CCTTGCTTGC CGCTGAGCGC AAAGTACGCG CTAATATGCA GAAATTGCGT
TATTACATGC ACAGTGGCGA AGCATTCGAT GAGCAGAGCC AAGCGCCTAA AAGTGCAGCG
AAAATCACCT GGCCTGCGTC ATTTAATTTG GCGGTAAAAA GCAGTGATGT AGATAACCAC
CCGGCTCTGG CGGCGAAAGC CCTAGAGATG CAAGCTCTCA AGCAAAAAAT GCGTTTGGCA
CAGGTGGCAC TTTTGCCTAA GCTCGATATC GAAGCCAAAG TGGCGCGAGA CATAGGCTCA
GGCCCTACGT CTTTGCAAGA CACTGAGGCC AAGATAGGCT TGTATTTTTC AGTCCCTTTT
GACCGCACGC AAGCCAAAGC CAAAAAGAGT AGAACTCAGT ATGAAATCTA CGCTCTGGAA
TCAAAAACAA ACGCATTACG TCAATCAATT GATGCAAAAC GACAAGAACG TCTGGTGAAT
CTGTCCTATG CCAAGCGCTT GCATGATATG CAAACCAAGC AGGTCGTCTT ATCACGCAAG
CTCTTTGAAC AAGAACAGCG GCAGTTTGAA TTTGGCTCCA GCGATTTTTT TATGCTCAAC
AATCGAGAAG CCGATGCATT TCAAGCGGAA TTAAAAGCCC TTACCACACG TATTAATGTG
TTTCGTGAAG AGCTCGCGCT CCTTAAAATA AACGCCGTCT TAGACCATCC ATTTATTCAG
AAAACACTTA GAGCGCATAC ATTATCTATC AGGTAA
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| Protein sequence | MYGVLISALV LLGFSASSAA FTLQQYLSSV ANNHPEILAI DATTGQYGAD IQYADGAYDA
KLEHNSFSRV AGYYDGLQAS QKFSKPLEAY NAEIFSEYRI SDGDFPVYEQ EYATLSGGEA
SLGVKLSLLQ GRDTDKKRTA MASARLKYKM WSEEAKLAQS EFYYSAILAY LDWVEAVSYF
NKIEQLVAVS VNRQEGIKTR VAEGDVAEFE LLEFETRLLE RQSSLLAAER KVRANMQKLR
YYMHSGEAFD EQSQAPKSAA KITWPASFNL AVKSSDVDNH PALAAKALEM QALKQKMRLA
QVALLPKLDI EAKVARDIGS GPTSLQDTEA KIGLYFSVPF DRTQAKAKKS RTQYEIYALE
SKTNALRQSI DAKRQERLVN LSYAKRLHDM QTKQVVLSRK LFEQEQRQFE FGSSDFFMLN
NREADAFQAE LKALTTRINV FREELALLKI NAVLDHPFIQ KTLRAHTLSI R
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