| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_3997 |
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| Symbol | |
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| ID | 8727755 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | + |
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| Start bp | 4808847 |
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| End bp | 4810307 |
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| Gene Length | 1461 bp |
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| Protein Length | 486 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | |
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| Product | Outer membrane protein-like protein |
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| Protein accession | YP_003388786 |
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| Protein GI | 284038856 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.000000000837564 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAGACGA TTATATTCGG TTTAAGTCTG TTGATTGGTA GTCAGTTAAT TTCGGCCGCT
CAAGCACAGC CAGCGGGAAC ATCCTCTGAC ACAACCCTGT TTACAGCCGC CGATTTTTAC
CGGGTCGTTT TTAGCCATCA TCCCCTTGTT CGACAGGCGG CTCTGCTGAA CAGCGAAGCC
CAGCAGGAAA TTATGCAGGC CAGGGGTGCT TTTGACCCCA AGCTATTCTC AACCTACGAC
CGGAAAGAGT TTGGGCAGGA TTTGTATTAT AACAAATGGC AGTCCGGCTT GACAATACCC
GTTCTGCCAG CCGGTATCGA CGTAAAGCTG ACCTATGACC GGAATATGGG GCAGTATGTC
AACCCCGAAG AGCGGGTACC GTCGTCGGGT CTGGCGGCCG TGGGAGTACG CGTTCCCGTT
GGTCAGGGGC TGATTATCGA TGCCCGACGC AACGCCCTGC GCCAGGCTAA ACTTGCCGTT
ACCCTGGCCG ATGCCGAACG CCTGAAACTC ATCAACAAAA CCTTGTTCGA TGCGGCCAAA
ACCTATTGGG AATGGTATAT GGCTCACCAG CAGTATCGGC TGATCCAAAA CGGCTATCAG
GTAGCCGACA CCCGCTTCCG GGCCATCCAA CAGCGGTCAT TGCTGGGCGA TGCGGCCGCC
ATCGATACTA CTGAAGCGCT CATTACGGCC CAGGACCGCC TGGTGCAACT CCAGCAAGCG
GAAGTCAATC TGCAAAATGC CCGATTGCGG TTGAGTGTTT TCTTATGGAA CAGTACTGAT
AGCGATGGCA TGCCCCAACC GGTTGAACTT CTGCCTACAG TGGCCCCTCA GCCGGTGCCC
GCCGACCGGC TCGATGAAAG TACACTACAG GCCTTGCTGA GTAAAGCCGC CGAACGGCAC
CCGGAGTTGC TGAAACTAAC CACCAAAGGA CAGCAGCTGG CACTGGAAGA GCGATTTCAG
CGGTCTTTAC TGCAACCGCA ACTGGTGTTA AACGCTAATC TGCTTAGCCG GACACCCGCA
GCCGGTGTTG GCTACGACTG GGCGAGTTAT TACGCCTTTC GAGCCGATAA TCACAAAATC
GGGGTGGACT TGACCTTTCC TATCTTTCTG CGAAAAGAGC GGGGCAAGCT TCGGCAAATA
CAGATCAAAA ACCAGCAGGT TACACTAGAA CGCCAGCAAA CCGGCCGTGC CATCAGCAAC
GATGTTCAGG CAGCCTGGAA CGAGCTAAAG GCGCTGGAGC GCCAGATCGA TGTACAGCAG
CAGACGGTCA GGAACCAACG GATTTTACTT GGGGCAGAAC AGCAGAAATT CGACATCGGT
GAGAGTTCAC TGTTTTTAGT CAACAGCCGC GAATCGAAAC TGATCGATTT GGAAATCAAG
CTGGAAGAGC TACGTACCAA ACAGCAGAAA GCGGTAGCCG CCCTGTGGTA CGCAGCCGGA
ACAAATCCAG AAGCGCAGTA A
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| Protein sequence | MKTIIFGLSL LIGSQLISAA QAQPAGTSSD TTLFTAADFY RVVFSHHPLV RQAALLNSEA
QQEIMQARGA FDPKLFSTYD RKEFGQDLYY NKWQSGLTIP VLPAGIDVKL TYDRNMGQYV
NPEERVPSSG LAAVGVRVPV GQGLIIDARR NALRQAKLAV TLADAERLKL INKTLFDAAK
TYWEWYMAHQ QYRLIQNGYQ VADTRFRAIQ QRSLLGDAAA IDTTEALITA QDRLVQLQQA
EVNLQNARLR LSVFLWNSTD SDGMPQPVEL LPTVAPQPVP ADRLDESTLQ ALLSKAAERH
PELLKLTTKG QQLALEERFQ RSLLQPQLVL NANLLSRTPA AGVGYDWASY YAFRADNHKI
GVDLTFPIFL RKERGKLRQI QIKNQQVTLE RQQTGRAISN DVQAAWNELK ALERQIDVQQ
QTVRNQRILL GAEQQKFDIG ESSLFLVNSR ESKLIDLEIK LEELRTKQQK AVAALWYAAG
TNPEAQ
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