8 homologs were found in PanDaTox collection
for query gene PP_3678 on replicon NC_002947
Organism: Pseudomonas putida KT2440



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_002947  PP_3678  hypothetical protein  100 
 
 		 487 aa  1016    Pseudomonas putida KT2440  Bacteria  normal  0.0167318  normal  0.0197508 
 
 
-
 
NC_007951  Bxe_A3513  hypothetical protein  25.87 
 
 		 507 aa  138  3.0000000000000003e-31  Burkholderia xenovorans LB400  Bacteria  normal  1  normal  0.308433 
 
 
-
 
NC_009656  PSPA7_6060  site-specific recombinase, phage integrase family protein  22.93 
 
 		 457 aa  81.6  0.00000000000003  Pseudomonas aeruginosa PA7  Bacteria  normal  0.212116  n/a   
 
 
-
 
NC_004578  PSPTO_4748  site-specific recombinase, phage integrase family  22.63 
 
 		 474 aa  66.2  0.000000001  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.830448  n/a   
 
 
-
 
NC_011312  VSAL_I0966  putative phage recombinase/integrase  22.52 
 
 		 453 aa  58.2  0.0000003  Aliivibrio salmonicida LFI1238  Bacteria  normal  1  n/a   
 
 
-
 
NC_010322  PputGB1_4790  integrase family protein  21.5 
 
 		 488 aa  57.4  0.0000006  Pseudomonas putida GB-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009654  Mmwyl1_4220  phage integrase family protein  20.38 
 
 		 475 aa  50.4  0.00006  Marinomonas sp. MWYL1  Bacteria  normal  0.0478552  normal  0.746651 
 
 
-
 
NC_010322  PputGB1_1638  integrase family protein  19.65 
 
 		 459 aa  45.4  0.002  Pseudomonas putida GB-1  Bacteria  normal  1  normal  1 
 
 
-
 
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