Gene PP_3678 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_3678 
Symbol 
ID1045397 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp4180132 
End bp4181595 
Gene Length1464 bp 
Protein Length487 aa 
Translation table11 
GC content43% 
IMG OID637147090 
Producthypothetical protein 
Protein accessionNP_745812 
Protein GI26990387 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0167318 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0197508 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACTAAAC AGCTTTATTC AATCTATGAA TCAGAAATCA TTCCTGACGC AGCCCAACCA 
AACCATAAGA CTGGCGAATT CTCCGCGAAA TATAGAAAAA TCAGAAATTT GGCACTTATG
CGCTGGCCCA ATTCACGACC TTGCCACCTA GCAAATCAAT GGCTTTTCCA TATGAGTACT
AAAACAAACG CCAAGGACTC CTGCAAAACC GTCGCATCAG AACTAACCCA TTTAATTAGA
TACTGCTATG TGAAAAACAT CTCTATCAAT GACTTCAATG ACACACACTT CAATAAACTA
ACTGAAGATC TATCTAATGA AGTCACACTT ACACCAACGG GTGCCAGGCC TAAGCGCAAC
AGAAATCGCA TCAGGCAAAT ACAGCACACA ACGCTTAACT TCCTGTATTG GATTAGCGAA
AATATGTCTG GCCTCAACGA CTTCCCAATT GTGGGCCCAG GAAATAGCGG CGCGAACATC
ATAATTGAAT TAAAAATAAA TCCTCATAAT GGGCGACAGT ATCTAGACCA TCCCGACCTT
GTGCCTACTG AAGATGAAGT ATATGACAAA GCGCCTATTG ATGAGCATAC CATCCAAAAA
CTGCAAGATG AGATATTTAG AAGGCACGAC TGGGAAGAGC TCCCTCCAGG CGCAACCCTC
AAGTACAAGC ACAACCCAGA TCTATATGTC GCCACAAATC TTTATATTTA TGAAAGACGC
ATGTTTATCA TCAGGATGAT GAAACTCATG GGCATGCGAC CAGAGGAACT ATACGACCTT
GACTTAAAGG ACAACCTCCA TGTATTAGAA AAAAAAGAAA TTCTTGTACC TACAAAAAAA
CGGGGAATAC CTGCACCCAT ACGCCACTTC AAAGTCAATG CCCCCTCAGC ACGCCAGTTC
GATGCCTATT TAGACGCTAG AAAATCCTAT ATAGATTTTT TGCACTCGCG GGGTATTAAA
TGCGTACACC CTGAAAAAAT TCTCATCGGA GCTTATGGCT CTCGCATAAA AAAGGAATCT
ATAACTAAAG AGTTCGACAG GATATGCGAG GATGCGGGCT TGACCAGCAT AAGAGTTTGC
CTATCAATGT TTCGTCATCG TTTCGTAACT CGTGAAGTAA GAATTCGCCT CGAGCTTAGG
TTCGCTAAGC ATCCGGAGTT AAAGAATGGA TGGACTGCCG GGCTTCGAGA TGAGGTGTGT
CGAGAAGTTA TAGAACTGAC TGGCCACGCA GATCCAGCTT CACTGCATCA TTACTTTCAC
AGTGAATATA CAGCCGTCAC TTCAGATGCT ACCTACAGCT CTATGCTTAA ACTGAAGGAT
GAAATCGATG CTGCAAATGA GACTATCACA GCCTTAGAGC ACAAAGCGAA GATTGGCAAA
ATAGACTGTT CAGTAGAGAT TACGTCACTT AAGTCCACAG TAGCCAGCCT TCAATCTCTG
CTTTCCAGAC TCGGCGCGGC CTGA
 
Protein sequence
MTKQLYSIYE SEIIPDAAQP NHKTGEFSAK YRKIRNLALM RWPNSRPCHL ANQWLFHMST 
KTNAKDSCKT VASELTHLIR YCYVKNISIN DFNDTHFNKL TEDLSNEVTL TPTGARPKRN
RNRIRQIQHT TLNFLYWISE NMSGLNDFPI VGPGNSGANI IIELKINPHN GRQYLDHPDL
VPTEDEVYDK APIDEHTIQK LQDEIFRRHD WEELPPGATL KYKHNPDLYV ATNLYIYERR
MFIIRMMKLM GMRPEELYDL DLKDNLHVLE KKEILVPTKK RGIPAPIRHF KVNAPSARQF
DAYLDARKSY IDFLHSRGIK CVHPEKILIG AYGSRIKKES ITKEFDRICE DAGLTSIRVC
LSMFRHRFVT REVRIRLELR FAKHPELKNG WTAGLRDEVC REVIELTGHA DPASLHHYFH
SEYTAVTSDA TYSSMLKLKD EIDAANETIT ALEHKAKIGK IDCSVEITSL KSTVASLQSL
LSRLGAA