| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_4790 |
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| Symbol | |
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| ID | 5872604 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 5358502 |
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| End bp | 5359968 |
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| Gene Length | 1467 bp |
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| Protein Length | 488 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641549928 |
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| Product | integrase family protein |
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| Protein accession | YP_001671012 |
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| Protein GI | 167035781 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTACCG CAAAAAAGAC TAAGGAGCGG TCAACGCACA AGCTCTATAG CTTGCTGGGC
GAGTTTCAGA CGTTCAGTCA CTATTCAGTT GGTCGTACCA GTTTGCGGGA TGCGACGAAC
ATTCCTTTCA TGAACTGGCC CAACGGGTCA CCGTGCATCA TCGGCAACCT TTACATGCTT
AGCCTCTTCA ACAGGAAAGG GCGAGGATCC CGGCGCGGCC TTTCTCGTTC CGGTCAAGAT
GGCGGGAGCA TGGGGGATTA TGCAGCAAAA CTAAGTCAAC TATTGCGTCG ATGCTATCAC
GATAAGATAG AGCCTATAAT GCTAACCGAT GGCGACTTCA CTGACTACAT AACGGAGTTG
CGCGAAGAAA AATCCCTTAT AAATCCGGGC ACACGAAAGC GAACAGAAGA TACAATTTCT
GATATAGGCC GTGTTTGGCT TGATTTTTTA AGTTTTGTAG GTCGCTTGCA TGGATATCAA
GACTTTGTTG CGCCTGAAGG CAGAATACGC GTAATGGAGA AAACCTACAA CACCGTCGAC
AGATCGGGTC GCAAATTATC CCGCTCATAC TTAGTACATC ATTCTTTCGG CCCGCCTTCG
CGAAAGAAGA AAAGAAACCC AATCACAGTT GAACAAATAG CACTACTTAA AGACACTGCG
CGAAAAGAAA AAACCTCCAA CTTCGTTAAA GCTAGACGCT CCCTGCTTAT TGATCTCCTC
ACTGATACTG GAGCACGGCG CTCAGAAATA GAACAAATCA CAATTGATGA TATTAAAGCT
GCCAAAAGAC TTGAAAAGAA CCCTACCCTA AGACTAACCA CTCTAAAGCA GCACGGCGAG
CTTAGCTTTA GGGAAGTACC CGTTTTGCCC ACATTGCTGC ACCTCCTCAA TAACCACATT
GAGAGACAGC GCAACAACAT CATGAAAAAG AAATACAAAG AAGGAAATGA CCATCGAAGA
TTCTTTGTCT CCGAGAGAAC CGGCCGCCCA CTAACAAGCA AAACCTTATA TAACGAAATC
AAAATACTGA AAGCAGCTTC AGGAATAGAA CCCCCTATCT TTCCACATAT GTTTAGACAC
CGCTTTATCA CTAAGCTTTT CATTGACCTA ATCAGGACAC ACCAAGTTAC GAATGAAGAC
GAATTCCGGC GCAACCTCCT AAACACGGAG ATCTTCAAAG CCGAGGTAAC GGAGTGGACT
GGGCACTTAG ACCCAGATTC GATCAACGAC TATCTACATT TAGCCCTCGC TGCCTCCGCA
GACTATGCGG ATACCGTCAA TACAGTTCAC ATGCAGCGTG CTATGGATGC ATACTTTGAA
CGAGAAGCTG AGCTTACCCG CCGTTTGGAT GAAGGCTTGT CCGTGGAGGA CTACAAGAAA
GAGATGAAGC TCCTGAAAGA GCTGGTGCAG AAGGACTTTG AGGTTGCACG CACTAGAGAG
GCTTCGGTCA AAAGCAAGCG CTTATAG
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| Protein sequence | MTTAKKTKER STHKLYSLLG EFQTFSHYSV GRTSLRDATN IPFMNWPNGS PCIIGNLYML
SLFNRKGRGS RRGLSRSGQD GGSMGDYAAK LSQLLRRCYH DKIEPIMLTD GDFTDYITEL
REEKSLINPG TRKRTEDTIS DIGRVWLDFL SFVGRLHGYQ DFVAPEGRIR VMEKTYNTVD
RSGRKLSRSY LVHHSFGPPS RKKKRNPITV EQIALLKDTA RKEKTSNFVK ARRSLLIDLL
TDTGARRSEI EQITIDDIKA AKRLEKNPTL RLTTLKQHGE LSFREVPVLP TLLHLLNNHI
ERQRNNIMKK KYKEGNDHRR FFVSERTGRP LTSKTLYNEI KILKAASGIE PPIFPHMFRH
RFITKLFIDL IRTHQVTNED EFRRNLLNTE IFKAEVTEWT GHLDPDSIND YLHLALAASA
DYADTVNTVH MQRAMDAYFE REAELTRRLD EGLSVEDYKK EMKLLKELVQ KDFEVARTRE
ASVKSKRL
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